Job Description P37338 Confidence 100.00% Date Thu Jan 5 11:55:19 GMT 2012 Rank 5 Aligned Residues 215 % Identity 17% Template c2di3A_ PDB info PDB header:transcription Chain: A: PDB Molecule:bacterial regulatory proteins, gntr family; PDBTitle: crystal structure of the transcriptional factor cgl29152 from corynebacterium glutamicum Resolution 2.05 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																											.
Query SS confidence																											.
Query Sequence		T	S	L	D	G	Y	R	W	L	K	N	D	I	I	R	G	N	F	Q	P	D	E	K	L	R	.	M	S	L	L	T	S	R	Y	A	L	G	V	G	P	L	R	E	A	L	S	Q	L	V	A	E	R	L	V	T	V	V	N	Q	K	G	Y	R	V	A	S	M	S	E	Q	E	L	L	D	I	F	D	A	R	A
Query Conservation																											.
Alig confidence																											.
Template Conservation
Template Sequence		A	H	E	S	V	M	D	W	V	T	E	E	L	R	S	G	R	L	K	I	G	D	H	L	P	S	E	R	A	L	S	E	T	L	G	V	S	R	S	S	L	R	E	A	L	R	V	L	E	A	L	G	T	I	S	T	A	T	G	S	G	P	R	S	G	T	I	I	T	A	A	P	G	Q	A	L	S	L	S	V
Template Known Secondary structure																	T	S	S		T	T		B												T																	T	S					S	T	T	S	G	G	G										S
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.												.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	M	E	A	M	L	V	S	L	A	I	A	R	G	G	D	E	W	E	A	D	V	L	A	.	.	.	.	.	.	.	.	.	.	.	K	A	H	L	L	S	K	L	E	A	C	D	A	S	E	K	M	L	D	E	W	D	L	R	H	Q	A	F	H	T	A	I	V	A	G	C	G	S	H	Y	L	L	Q	M	R
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	Q	L	V	T	N	Q	V	G	H	H	D	I	Y	E	T	R	Q	L	L	E	G	W	A	A	L	H	S	S	A	E	R	G	D	W	D	V	A	E	A	L	L	E	K	M	D	D	P	S	L	P	L	E	D	F	L	R	F	D	A	E	F	H	V	V	I	S	K	G	A	E	N	P	L	I	S	T	L	M
Template Known Secondary structure							T	T	S	S																			T	B		T	T	T	S												T	T		T	T	S																		T	T	B	S	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	R	L	F	D	L	A	A	R	Y	R	F	I	W	L	R	R	T	V	L	S	V	E	M	L	E	D	K	H	D	Q	H	Q	T	L	T	A	A	V	L	A	R	D	T	A	R	A	S	E	L	M	R	Q	H	L	L	T	P	I	P	I	I	Q	Q	A	M	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	L	R	L	S	V	A	D	H	T	V	A	R	A	R	A	L	P	D	W	R	A	T	S	A	R	L	Q	K	E	H	R	A	I	L	A	A	L	R	A	G	E	S	T	V	A	A	T	L	I	K	E	H	I	E	G	Y	Y	E	E	T	A	A	A	E	A
Template Known Secondary structure																	T	T		S																						T	T																								S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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