|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | F | C | V | I | Y | R | S | S | K | R | D | Q | T | Y | L | Y | V | E | K | K | D | D | F | S | R | V | P | E | E | L | M | K | G | F | G | Q | P | Q | L | A | M | I | L | P | L | D | G | R | K | K | L | V | N | A | D | I | E | K | V | K | Q | A | L | T | E | Q | G | Y | Y | L | Q | L | P | P | P | P | E | D | L |
Query Conservation |   |
|
|
|   |
|
|
|
|   |
|
|   |   |
|
|
|
|
|   |
|   |
|   |
|   |   |
|
|
|   |
|
|   |   |
|
|   |
|   |   |
|
|   |
|   |
|   |   |   |   |   |
|
|
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|   |   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|
|
|
|   |
|
|   |   |
|
|
|
|
|   |
|   |
|
|
|   |   |
|
|
|   |
|
|   |   |
|
|   |
|   |   |
|
|   |
|   |
|   |   |   |
|
|
|
|
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|
|
|
|   |   |
|   |
|
Template Sequence |   |
M | F | C | V | I | Y | R | S | S | K | R | D | Q | T | Y | L | Y | V | E | K | K | D | D | F | S | R | V | P | E | E | L | M | K | G | F | G | Q | P | Q | L | A | M | I | L | P | L | D | G | R | K | K | L | V | N | A | D | I | E | K | V | K | Q | A | L | T | E | Q | G | Y | Y | L | Q | L | P | P | P | P | E | D | L |
Template Known Secondary structure |   |
|
|  |  |  |  |  |  | T | T | S | S | S |
|  |  |  |  | S | S | S | S |
|
|
| S | S |
|  |  |  |  |  |  |  |
| S |  |  |  |  |  |  |  |
| S | S | S |
|
|
|
| S | S | S |
|  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |
|
|
|
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | K | Q | H | L | S | V | M | G | Q | K | T | D | D | T | N | K |
Query Conservation |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | K | Q | H | L | S | V | M | G | Q | K | T | D | D | T | N | K |
Template Known Secondary structure |   |
| S |
| S | S |
| S | S |
| S |
| S |
|
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
94 | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 |
  |