Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB43
Confidence17.83%DateThu Jan 5 11:14:35 GMT 2012
Rank6Aligned Residues61
% Identity16%Templated1q8ka2
SCOP infoFerredoxin-like eIF-2-alpha, C-terminal domain eIF-2-alpha, C-terminal domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50 .........60........ .70..... ....80.........90......
Predicted Secondary structure 







...



..

.....








Query SS confidence 














. . .

















. .






. . . . .




















Query Sequence  GQPQLAMILPLDGRK. . . KLVNADIEKVKQALTEQG. . YYLQLPP. . . . . PPEDLLKQHLSVMGQKTDDTN
Query Conservation 
 
  

 
 
    ... 


 
   
   
   
..






.....  
 

  
   
        
Alig confidence 














...

















..






.....




















Template Conservation 


 
 
   
 


 
   
  
   
   
 
 

   

  

 
   
   
   

     
 
  
Template Sequence  APPRYVMTTTTLERTEGLSVLSQAMAVIKEKIEEKRGVFNVQMEPKVVTDTDETELARQMERLERENAEVD
Template Known Secondary structure  TT
SSTTS


SS



SS

SGGG





Template Predicted Secondary structure 















Template SS confidence 






































































   230.........240.........250.........260.........270.........280.........290.........300
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions