Return to main results Retrieve Phyre Job Id

Job DescriptionP0AB43
Confidence5.43%DateThu Jan 5 11:14:35 GMT 2012
Rank48Aligned Residues24
% Identity17%Templated1p6ra_
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain Penicillinase repressor
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   46...50.........60.........
Predicted Secondary structure 








Query SS confidence 























Query Sequence  LDGRKKLVNADIEKVKQALTEQGY
Query Conservation 
     


 
   
   
   

Alig confidence 























Template Conservation 
        


 
 
 

  

 
Template Sequence  LSKTSTWSPKTIQTMLLRLIKKGA
Template Known Secondary structure  S


TTS
Template Predicted Secondary structure 








Template SS confidence 























   33......40.........50......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions