Job Description P0AFZ5 Confidence 97.87% Date Thu Jan 5 11:27:40 GMT 2012 Rank 13 Aligned Residues 131 % Identity 14% Template c3io5B_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:recombination and repair protein; PDBTitle: crystal structure of a dimeric form of the uvsx recombinase core2 domain from enterobacteria phage t4 Resolution 2.40 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60			.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.																													.	.
Query SS confidence																						.	.	.																													.	.
Query Sequence		F	S	S	A	A	S	K	I	A	R	V	S	T	E	N	T	T	A	G	L	.	.	.	I	S	E	V	V	Y	R	E	D	Q	P	M	M	T	Q	L	L	L	L	P	L	L	Q	Q	L	G	Q	Q	.	.	S	R	W	Q	L	W	L	T	P	Q	Q	K	L	S	R	E	W	V	Q	A	S	G	L	P	L	T	K
Query Conservation																						.	.	.																													.	.
Alig confidence																						.	.	.											.					.													.	.
Template Conservation																																			.					.
Template Sequence		V	R	T	K	I	P	M	M	N	I	A	L	S	G	E	I	T	G	G	M	Q	S	G	L	L	I	L	A	G	P	S	K	S	.	F	K	S	N	.	F	G	L	T	M	V	S	S	Y	M	R	Q	Y	P	D	A	V	C	L	F	Y	D	S	E	F	G	I	T	P	A	Y	L	R	S	M	G	V	D	P	E	R
Template Known Secondary structure					S										S	S	T	T					S									S	S	S	.	S				.														T	T								S	S											T	T			G	G	G
Template Predicted Secondary structure																																			.					.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.					.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																						.	.	.													.	.	.	.										.	.	.	.
Query SS confidence																						.	.	.													.	.	.	.										.	.	.	.
Query Sequence		V	M	Q	I	S	Q	L	S	P	C	H	T	V	E	S	M	V	R	A	L	.	.	.	R	T	G	N	Y	S	V	V	I	G	W	L	.	.	.	.	A	D	D	L	T	E	E	E	H	.	.	.	.	A	E	L	V	D	A	A	N	E	G	N	A	M	G	F	I	M
Query Conservation																						.	.	.													.	.	.	.										.	.	.	.
Alig confidence																						.	.	.													.	.	.	.										.	.	.	.
Template Conservation
Template Sequence		V	I	H	T	P	V	Q	S	L	E	Q	L	R	I	D	M	V	N	Q	L	D	A	I	E	R	G	E	K	V	V	V	F	I	D	S	L	G	N	L	A	S	K	T	R	A	K	T	M	K	S	L	F	R	I	V	T	P	Y	F	S	T	K	N	I	P	C	I	A	I
Template Known Secondary structure								S	B														T			T	T										S	T	T		B																						T	T
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions