Job Description P0AFZ5 Confidence 98.86% Date Thu Jan 5 11:27:40 GMT 2012 Rank 11 Aligned Residues 135 % Identity 13% Template c3cmwA_ PDB info PDB header:recombination/dna Chain: A: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures Resolution 2.80 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		F	S	S	A	A	S	K	I	A	R	V	S	T	.	E	N	T	T	A	G	L	I	S	E	V	V	Y	R	E	D	Q	P	M	M	T	Q	L	L	L	L	P	L	L	Q	Q	L	G	Q	Q	S	R	W	Q	L	W	L	T	P	Q	Q	K	L	S	R	E	W	V	Q	A	S	G	L	P	L	T	K	V	M	Q	I
Query Conservation															.
Alig confidence															.																		.					.
Template Conservation																																	.					.
Template Sequence		I	S	T	G	S	L	S	L	D	I	A	L	G	A	G	G	L	P	M	G	R	I	V	E	I	Y	G	P	E	S	S	.	G	K	T	T	.	L	T	L	Q	V	I	A	A	A	Q	R	E	G	K	T	C	A	F	I	D	A	E	H	A	L	D	P	I	Y	A	R	K	L	G	V	D	I	D	N	L	L	C	S
Template Known Secondary structure					S								T	S	S	S	S			T	T	S							S	T	T	S	.	S				.												T	T								T	T	S										T	T			G	G	G
Template Predicted Secondary structure																																	.					.
Template SS confidence
		3040	.	.	.	.	.	.	.	.	.	3050	.	.	.	.	.	.	.	.	.	3060	.	.	.	.	.	.	.	.	.	3070		.	.	.	.		.	.	.	.	.	3080	.	.	.	.	.	.	.	.	.	3090	.	.	.	.	.	.	.	.	.	3100	.	.	.	.	.	.	.	.	.	3110	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.																						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	L	S	P	C	H	T	V	E	S	M	V	R	A	L	R	T	G	N	Y	S	V	V	I	G	W	L	A	D	D	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	E	H	A	E	L	V	D	A	A	N	E	G	N	A	M	G	F	I	M	R	P	V	S
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	P	D	T	G	E	Q	A	L	E	I	C	D	A	L	A	R	S	G	A	V	D	V	I	V	V	D	S	V	A	A	L	T	P	K	A	E	I	E	G	E	I	G	D	S	H	M	G	L	A	A	R	M	M	S	Q	A	M	R	K	L	A	G	N	L	K	Q	S	N	T	L	L	I	F	I	N	Q	I	R
Template Known Secondary structure				S	S															T			S					S		G	G	G									S		T	T				T	T																				T	T
Template Predicted Secondary structure
Template SS confidence
		3118	.	3120	.	.	.	.	.	.	.	.	.	3130	.	.	.	.	.	.	.	.	.	3140	.	.	.	.	.	.	.	.	.	3150	.	.	.	.	.	.	.	.	.	3160	.	.	.	.	.	.	.	.	.	3170	.	.	.	.	.	.	.	.	.	3180	.	.	.	.	.	.	.	.	.	3190	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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