Job Description P0AFZ5 Confidence 6.64% Date Thu Jan 5 11:27:40 GMT 2012 Rank 88 Aligned Residues 132 % Identity 8% Template c3bgwD_ PDB info PDB header:replication Chain: D: PDB Molecule:dnab-like replicative helicase; PDBTitle: the structure of a dnab-like replicative helicase and its interactions2 with primase Resolution 3.91 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80					.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.
Query SS confidence																																																																								.	.	.	.
Query Sequence		S	S	F	S	S	A	A	S	K	I	A	R	V	S	T	E	N	T	T	A	G	L	I	S	E	V	V	Y	R	E	D	Q	P	M	M	T	Q	L	L	L	L	P	L	L	Q	Q	L	G	Q	Q	S	R	W	Q	L	W	L	T	P	Q	Q	K	L	S	R	E	W	V	Q	A	.	.	.	.	S	G	L	P	L	T
Query Conservation																																																																								.	.	.	.
Alig confidence																.													.										.																																	.	.	.	.
Template Conservation																.													.										.
Template Sequence		T	G	V	P	S	G	F	T	E	L	D	R	M	T	.	Y	G	Y	K	R	R	N	F	V	L	I	A	.	A	R	P	S	M	G	K	T	A	.	F	A	L	K	Q	A	K	N	M	S	D	N	D	D	V	V	N	L	H	S	L	E	M	G	K	K	E	N	I	K	R	L	I	V	T	A	G	S	I	N	A	Q
Template Known Secondary structure			S	B			S									.	S	S	B		S	S							.			S	S	S	S				.												T	T								S	S	S														S
Template Predicted Secondary structure																.													.										.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		K	V	M	Q	I	S	Q	L	S	P	C	H	T	V	E	S	M	V	R	A	L	R	T	G	N	Y	S	V	V	I	G	W	L	A	D	D	L	T	E	E	E	H	A	E	.	.	L	V	D	A	A	N	E	G	N	A	M	G	F	I	M
Query Conservation																																														.	.
Alig confidence																																														.	.
Template Conservation
Template Sequence		K	I	K	A	A	R	R	D	F	A	S	E	D	W	G	K	L	S	M	A	I	G	E	I	S	N	S	N	I	N	I	F	D	K	A	G	Q	S	V	N	Y	I	W	S	K	T	R	Q	T	K	R	K	N	P	G	K	R	V	I	V	M
Template Known Secondary structure					T	T	G	G	G	T			S														T	S								S	S		B															S		S	S
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions