Job Description P0AFZ5 Confidence 31.04% Date Thu Jan 5 11:27:40 GMT 2012 Rank 25 Aligned Residues 96 % Identity 11% Template c1t4gA_ PDB info PDB header:recombination Chain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: atpase in complex with amp-pnp Resolution 2.00 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.																	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	S	F	S	S	A	A	S	K	I	A	R	V	S	T	E	N	T	T	A	G	L	I	S	E	V	V	Y	R	E	D	Q	P	M	M	T	Q	L	L	L	L	P	L	L	Q	Q	L	G	Q	Q	S	R	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	W	L	T	P	Q	Q	K	L	S
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.										.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.										.
Template Sequence		W	K	L	S	T	S	S	S	E	L	D	S	V	L	G	G	G	L	E	S	Q	S	V	T	E	F	A	.	G	V	F	G	S	G	K	T	Q	.	I	M	H	Q	S	C	V	N	L	Q	N	P	E	F	L	F	Y	D	E	E	A	V	S	K	G	E	V	A	Q	P	K	A	V	Y	I	D	T	E	G	T	F	R
Template Known Secondary structure							S								T	T	T	S			B	T	S						.		S	T	T	S	S				.									T	T		G	G	G					T	T	T	S		G	G	G	G	S	S								S	S	S
Template Predicted Secondary structure																													.										.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		75	.	.	.	.					80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.								.	.	.	.
Query SS confidence							.	.	.	.								.	.	.	.
Query Sequence		R	E	W	V	Q	.	.	.	.	A	S	G	L	P	L	T	.	.	.	.	K	V	M	Q	I	S	Q	L	S	P	C	H	T	V	E	S	M	V	R	A	L	R
Query Conservation							.	.	.	.								.	.	.	.
Alig confidence							.	.	.	.								.	.	.	.
Template Conservation
Template Sequence		P	E	R	I	M	Q	M	A	E	H	A	G	I	D	G	Q	T	V	L	D	N	T	F	V	A	R	A	Y	N	S	D	M	Q	M	L	F	A	E	K	I	E	D
Template Known Secondary structure													T	S								T							S	S										T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions