Job Description P0AFZ5 Confidence 8.64% Date Thu Jan 5 11:27:40 GMT 2012 Rank 71 Aligned Residues 152 % Identity 14% Template c1szpC_ PDB info PDB header:dna binding protein Chain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament Resolution 3.25 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.							.	.	.	.	.	.	70	.	.	.	.	.					.	.	.	.	80
Predicted Secondary structure																																																							.	.	.	.	.	.													.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.													.	.	.	.
Query Sequence		S	S	F	S	S	A	A	S	K	I	A	R	V	S	T	E	N	T	T	A	G	L	I	S	E	V	V	Y	R	E	D	Q	P	M	M	T	Q	L	L	L	L	P	L	L	Q	Q	L	G	Q	Q	S	R	W	.	.	.	.	.	.	Q	L	W	L	T	P	Q	Q	K	L	S	R	.	.	.	.	E	W	V	Q	A
Query Conservation																																																							.	.	.	.	.	.													.	.	.	.
Alig confidence																													.										.																.	.	.	.	.	.													.	.	.	.
Template Conservation																													.										.
Template Sequence		I	C	L	T	T	G	S	K	N	L	D	T	L	L	G	G	G	V	E	T	G	S	I	T	E	L	F	.	G	E	F	R	T	G	K	S	Q	.	L	C	H	T	L	A	V	T	C	Q	I	P	L	D	I	G	G	G	E	G	K	C	L	Y	I	D	T	E	G	T	F	R	P	V	R	L	V	S	I	A	Q	R
Template Known Secondary structure							S									T	S	S			S	S	S						.		S	T	T	S	S				.									T	T	S		T	T	T	T			S	S							S	S	S				G	G	G	G
Template Predicted Secondary structure																													.										.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		81	.	.	.					.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.											.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure						.	.	.	.										.	.	.																																.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.										.	.	.																																.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	L	P	.	.	.	.	L	T	K	V	M	Q	I	S	Q	.	.	.	L	S	P	C	H	T	V	E	S	M	V	R	A	L	R	T	G	N	Y	S	V	V	I	G	W	L	A	D	D	L	T	.	.	.	.	.	.	.	.	.	.	E	E	E	H	A	E	L	V	D	A	A	N	E	G	N	A	M	G	F
Query Conservation						.	.	.	.										.	.	.																																.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.										.	.	.																																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	G	L	D	P	D	D	A	L	N	N	V	A	Y	A	R	A	Y	N	A	D	H	Q	L	R	L	L	D	A	A	A	Q	M	M	S	E	S	R	F	S	L	I	V	V	D	S	V	M	A	L	Y	R	E	L	S	A	R	Q	M	H	L	A	K	F	M	R	A	L	Q	R	L	A	D	Q	F	G	V	A	V	V
Template Known Secondary structure		T								G	G	G								S	T	T									T							S										T	T	G	G	G			T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	R	P	V	S	A	S	S	H	A	T	R	Q	L	S	G	L	K	I	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	N	Q	V	G	G	N	I	M	A	H	S	S	T	T	R	L	G	F	K
Template Known Secondary structure																S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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