Job Description P0AGF6 Confidence 100.00% Date Thu Jan 5 11:28:58 GMT 2012 Rank 38 Aligned Residues 304 % Identity 18% Template d1vb3a1 SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.20

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																																												.	.
Query SS confidence																																																												.	.
Query Sequence		P	V	A	I	D	D	I	I	E	A	K	Q	R	L	A	G	R	I	Y	K	T	G	M	P	R	S	N	Y	F	S	E	R	C	K	G	E	I	F	L	K	F	E	N	M	Q	R	T	G	S	F	K	I	R	G	A	F	N	K	.	.	L	S	S	L	T	D	A	E	K	R	K	G	V	V	A	C	S	A	G	N
Query Conservation																																																												.	.
Alig confidence																			.	.										.	.	.	.	.	.	.																								.	.
Template Conservation																			.	.										.	.	.	.	.	.	.
Template Sequence		E	I	P	Q	E	I	L	E	E	R	V	R	A	A	F	A	F	.	.	P	A	P	V	A	N	V	E	S	.	.	.	.	.	.	.	D	V	G	C	L	E	L	F	H	G	P	T	L	A	F	K	D	F	G	G	R	F	M	A	Q	M	L	T	H	I	A	G	D	K	P	V	T	I	L	T	A	T	S	G	D
Template Known Secondary structure		G	S															S	.	.									T	.	.	.	.	.	.	.	T									S	T	T	S	B	T																T	T	T										S	S	S
Template Predicted Secondary structure																			.	.										.	.	.	.	.	.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.			.	.	.	.	.	.	.	90	.								.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		86	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.
Predicted Secondary structure										.																.																	.	.																								.	.	.	.	.
Query SS confidence										.																.																	.	.																								.	.	.	.	.
Query Sequence		H	A	Q	G	V	S	L	S	.	C	A	M	L	G	I	D	G	K	V	V	M	P	K	G	.	A	P	K	S	K	V	A	A	T	C	D	Y	S	A	E	V	.	.	V	L	H	G	D	N	F	N	D	T	I	A	K	V	S	E	I	V	E	M	E	G	R	.	.	.	.	.	I	F	I	P	P	Y	D	D	P
Query Conservation										.																.																	.	.																								.	.	.	.	.
Alig confidence										.																.																	.	.																								.	.	.	.	.
Template Conservation
Template Sequence		T	G	A	A	V	A	H	A	F	Y	G	L	P	N	V	K	V	V	I	L	Y	P	R	G	K	I	S	P	L	Q	E	K	L	F	C	T	L	G	G	N	I	E	T	V	A	I	D	G	D	F	D	A	C	Q	A	L	V	K	Q	A	F	D	D	E	E	L	K	V	A	L	G	L	N	S	A	N	S	I	N	I
Template Known Secondary structure										T	T	T		T	T									T	T		S										S			T	T								S												G	G	G									T					S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		K	V	I	A	G	Q	G	T	I	G	L	E	I	M	E	D	L	.	.	.	.	Y	D	V	D	N	V	I	V	P	I	G	G	G	G	L	I	A	G	I	A	V	A	I	K	S	I	N	P	T	I	R	V	I	G	V	Q	S	E	N	V	H	G	M	A	A	S	F	H	S	G	E	I	T	T	H	R	T	T	G
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																																								.
Template Conservation																																																														.
Template Sequence		S	R	L	L	A	Q	I	C	Y	Y	F	E	A	V	A	Q	L	P	Q	E	T	R	N	Q	L	V	V	S	V	P	S	G	N	F	G	D	L	T	A	G	L	L	A	K	S	L	G	L	P	V	K	R	F	I	A	A	T	N	V	N	.	D	T	V	P	R	F	L	H	D	G	Q	W	S	P	K	A	T	Q	A
Template Known Secondary structure							T	T								T	T	S		T	T	T	T	T	S								S	S													T	T				S								S		.										S
Template Predicted Secondary structure																																																														.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.						.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure															.	.													.	.	.	.	.
Query SS confidence															.	.													.	.	.	.	.
Query Sequence		T	L	A	D	G	C	D	V	S	R	P	G	N	.	.	L	T	Y	E	I	V	R	E	L	V	D	D	.	.	.	.	.	I	V	L	V	S	E	D	E	I	R	N	S	M	I	A	L	I	Q	R	N	K	V	V	T	E	G	A	G	A	L	A	C	A	A	L	L	S	G	K	L	D	Q	Y	I	Q	N	R	K
Query Conservation															.	.													.	.	.	.	.
Alig confidence															.	.													.	.	.	.	.																			.																	.	.	.	.
Template Conservation																																																				.																	.	.	.	.
Template Sequence		T	L	S	N	A	M	D	V	S	Q	P	N	N	W	P	R	V	E	E	L	F	R	R	K	I	W	Q	L	K	E	L	G	Y	A	A	V	D	D	E	T	T	Q	Q	T	M	R	E	L	K	E	.	L	G	Y	T	S	E	P	H	A	A	V	A	Y	R	A	L	.	.	.	.	R	D	Q	L	N	P	G	E	Y
Template Known Secondary structure			S	S	G	G	G			S	S		T	T											T	T			G	G	G	S																				.	T	T															.	.	.	.		T	T			T	T
Template Predicted Secondary structure																																																				.																	.	.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.		.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.					.	.	.	.	.	.	.	.	370
		306	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		T	V	S	I	I	S	G	.	G	N	I	D	L	S	R	V	S	Q	I	T	G	F
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		G	L	F	L	G	T	A	H	P	A	K	F	K	E	S	V	E	A	I	L	G	E
Template Known Secondary structure								B		G	G	G	G									T	S
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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