Job Description P0AGF6 Confidence 100.00% Date Thu Jan 5 11:28:58 GMT 2012 Rank 22 Aligned Residues 310 % Identity 20% Template d1v8za1 SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.21

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		14	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure														.																.
Query SS confidence														.																.
Query Sequence		I	I	E	A	K	Q	R	L	A	G	R	I	.	Y	K	T	G	M	P	R	S	N	Y	F	S	E	R	C	.	K	G	E	I	F	L	K	F	E	N	M	Q	R	T	G	S	F	K	I	R	G	A	F	N	K	L	S	S	L	T	D	A	E	K	R	K	G	V	V	A	C	S	A	G	N	H	A	Q	G	V	S
Query Conservation														.																.
Alig confidence														.																.
Template Conservation
Template Sequence		N	R	Q	L	N	Y	Y	L	K	T	W	A	G	R	P	T	P	L	Y	Y	A	K	R	L	T	E	K	I	G	G	A	K	I	Y	L	K	R	E	D	L	V	H	G	G	A	H	K	T	N	N	A	I	G	Q	A	L	L	A	K	F	M	G	K	T	R	L	I	A	E	T	G	A	G	Q	H	G	V	A	T	A
Template Known Secondary structure												T	T			S														T	S	S							G	G	G	S	T	T	S	B	T															T	T									S	S	S
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.						150	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																						.	.	.																	.	.						.	.	.	.	.
Query SS confidence																		.	.	.																						.	.	.																	.	.						.	.	.	.	.
Query Sequence		L	S	C	A	M	L	G	I	D	G	K	V	V	M	P	K	.	.	.	G	A	P	K	S	K	V	A	A	T	C	D	Y	S	A	E	V	V	L	H	G	.	.	.	D	N	F	N	D	T	I	A	K	V	S	E	I	V	E	M	.	.	E	G	R	I	F	.	.	.	.	.	I	P	P	Y	D	D	P	K	V
Query Conservation																		.	.	.																						.	.	.																	.	.						.	.	.	.	.
Alig confidence																		.	.	.																						.	.	.																	.	.						.	.	.	.	.
Template Conservation
Template Sequence		M	A	G	A	L	L	G	M	K	V	D	I	Y	M	G	A	E	D	V	E	R	Q	K	M	N	V	F	R	M	K	L	L	G	A	N	V	I	P	V	N	S	G	S	R	T	L	K	D	A	I	N	E	A	L	R	D	W	V	A	T	F	E	Y	T	H	Y	L	I	G	S	V	V	G	P	H	P	Y	P	T	I
Template Known Secondary structure							T	T													T	T											T	T								S	T	T	S	S																T	T	T							S	S		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		159	160		.	.	.	.	.	.	.	.	.	170	.	.	.						.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure				.														.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence				.														.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	.	G	Q	G	T	I	G	L	E	I	M	E	D	L	.	.	.	.	.	Y	D	V	D	N	V	I	V	P	I	G	G	G	G	L	I	A	G	I	A	V	A	I	K	S	I	N	P	T	I	R	V	I	G	V	Q	S	E	N	V	H	G	M	A	A	S	F	H	S	.	.	.	.	.	.	.	.	.	.
Query Conservation				.														.	.	.	.	.																																																		.	.	.	.	.	.	.	.	.	.
Alig confidence				.														.	.	.	.	.																									.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.
Template Sequence		V	R	D	F	Q	S	V	I	G	R	E	A	K	A	Q	I	L	E	A	E	G	Q	L	P	D	V	I	V	A	C	V	G	G	G	S	N	A	M	G	I	F	Y	P	F	V	.	N	D	K	K	V	K	L	V	G	V	E	A	G	G	K	G	L	E	S	G	K	H	S	A	S	L	N	A	G	Q	V	G	V	F
Template Known Secondary structure																						S	S			S							S	S	S								G	G	G	T	.	T		T	T	S										T	B	G	G	G	T	B	S
Template Predicted Secondary structure																																															.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
											223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	G	E	I	T	T	H	R	T	T	G	T	L	A	D	G	C	D	V	S	R	P	G	N	L	T	Y	E	I	V	R	E	L	V	D	D	I	V	L	V	S	E	D	E	I	R	N	S	M	I	A	L	I	Q	R	N	K	V	V	T	E	G	A	G	A	L	A	C	A	A	L	L
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	G	M	L	S	Y	F	L	Q	D	E	E	G	Q	I	K	P	T	H	S	I	A	P	G	L	D	Y	P	G	V	G	P	E	H	A	Y	L	K	K	I	Q	R	A	E	Y	V	T	V	T	D	E	E	A	L	K	A	F	H	E	L	S	R	T	E	G	I	I	P	A	L	E	S	A	H	A	V	A	Y	A	M
Template Known Secondary structure		T	T							B		T	T	S		B						S	S	T	T	S			S	B											T	T	S																							S			B
Template Predicted Secondary structure
Template SS confidence
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		S	G	K	L	D	Q	Y	I	Q	N	R	K	T	V	S	I	I	S	G	.	G	N	I	D	L	S	R	V	S	Q	I	T	G
Query Conservation																					.
Alig confidence					.																.
Template Conservation					.
Template Sequence		K	L	A	.	K	E	M	S	R	D	E	I	I	I	V	N	L	S	G	R	G	D	K	D	L	D	I	V	L	K	V	S	G
Template Known Secondary structure					.		T	S		T	T									B	B	S	G	G	G
Template Predicted Secondary structure					.
Template SS confidence
		355	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions