Job Description P0AGF6 Confidence 100.00% Date Thu Jan 5 11:28:58 GMT 2012 Rank 25 Aligned Residues 318 % Identity 19% Template d1qopb_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 1.4

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.																.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	P	V	A	I	D	D	I	I	E	A	K	Q	R	L	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	I	Y	K	T	G	M	P	R	S	N	Y	F	S	E	R	C	K	G	E	I	F	L	K	F	E	N	M	Q	R	T	G	S	F	K	I	R	G	A	F	N	K	L	S	S	L	T
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	L	M	P	A	L	N	Q	L	E	E	A	F	V	S	A	Q	K	D	P	E	F	Q	A	Q	F	A	D	L	L	K	N	Y	A	G	R	P	T	A	L	T	K	C	Q	N	I	T	A	G	T	R	T	T	L	Y	L	K	R	E	D	L	L	H	G	G	A	H	K	T	N	Q	V	L	G	Q	A	L	L	A	K
Template Known Secondary structure		G	G																T															T	T			S											T	T	S	S								G	G	G	S	T	T	S	B	T
Template Predicted Secondary structure
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.					.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																							.	.	.																									.	.	.	.
Query SS confidence																																							.	.	.																									.	.	.	.
Query Sequence		D	A	E	K	R	K	G	V	V	A	C	S	A	G	N	H	A	Q	G	V	S	L	S	C	A	M	L	G	I	D	G	K	V	V	M	P	K	.	.	.	G	A	P	K	S	K	V	A	A	T	C	D	Y	S	A	E	V	V	L	H	G	D	N	F	.	.	.	.	N	D	T	I	A	K	V	S	E	I	V	E
Query Conservation																																							.	.	.																									.	.	.	.
Alig confidence																																							.	.	.																									.	.	.	.
Template Conservation
Template Sequence		R	M	G	K	S	E	I	I	A	E	T	G	A	G	Q	H	G	V	A	S	A	L	A	S	A	L	L	G	L	K	C	R	I	Y	M	G	A	K	D	V	E	R	Q	S	P	N	V	F	R	M	R	L	M	G	A	E	V	I	P	V	H	S	G	S	A	T	L	K	D	A	C	N	E	A	L	R	D	W	S	G
Template Known Secondary structure			T	T									S	S	S														T																									T	T								S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
		144	.	.	.	.	.							150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.						.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure								.	.	.	.	.	.												.														.	.	.	.	.
Query SS confidence								.	.	.	.	.	.												.														.	.	.	.	.
Query Sequence		M	E	G	R	I	F	.	.	.	.	.	.	I	P	P	Y	D	D	P	K	V	I	A	.	G	Q	G	T	I	G	L	E	I	M	E	D	L	.	.	.	.	.	Y	D	V	D	N	V	I	V	P	I	G	G	G	G	L	I	A	G	I	A	V	A	I	K	S	I	N	P	T	I	R	V	I	G	V	Q	S	E
Query Conservation								.	.	.	.	.	.												.														.	.	.	.	.
Alig confidence								.	.	.	.	.	.												.														.	.	.	.	.																										.
Template Conservation																																																																					.
Template Sequence		S	Y	E	T	A	H	Y	M	L	G	T	A	A	G	P	H	P	Y	P	T	I	V	R	E	F	Q	R	M	I	G	E	E	T	K	A	Q	I	L	D	K	E	G	R	L	P	D	A	V	I	A	C	V	G	G	G	S	N	A	I	G	M	F	A	D	F	I	N	.	D	T	S	V	G	L	I	G	V	E	P	G
Template Known Secondary structure			T	T	T							S	S		S	S	T	T								T	T	T															S	S			S							S	S	S								G	G	G	T	T	.		T	T	S
Template Predicted Secondary structure																																																																					.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.		.	.	.	250	.	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.																				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	V	H	G	M	A	A	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	H	S	G	E	I	T	T	H	R	T	T	G	T	L	A	D	G	C	D	V	S	R	P	G	N	L	T	Y	E	I	V	R	E	L	V	D	D	I	V	L	V	S	E	D	E	I	R	N	S	M	I	A
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	H	G	I	E	T	G	E	H	G	A	P	L	K	H	G	R	V	G	I	Y	F	G	M	K	A	P	M	M	Q	T	A	D	G	Q	I	E	E	S	Y	S	I	S	A	G	L	D	F	P	S	V	G	P	Q	H	A	Y	L	N	S	I	G	R	A	D	Y	V	S	I	T	D	D	E	A	L	E	A	F	K	T
Template Known Secondary structure			T	B	G	G	G	T	B	S							S						T								B		T	T	S		B						S	S	G	G	G			S	S											T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		L	I	Q	R	N	K	V	V	T	E	G	A	G	A	L	A	C	A	A	L	L	S	G	K	L	D	Q	Y	I	Q	N	R	K	T	V	S	I	I	S	G	.	G	N	I	D	L	S	R	V	S	Q	I	T
Query Conservation																																										.
Alig confidence																																										.
Template Conservation
Template Sequence		L	C	R	H	E	G	I	I	P	A	L	E	S	S	H	A	L	A	H	A	L	K	M	M	R	E	Q	P	E	K	E	Q	L	L	V	V	N	L	S	G	R	G	D	K	D	I	F	T	V	H	D	I	L
Template Known Secondary structure							S			B																		S	T	T	S										B	B		G	G	G
Template Predicted Secondary structure
Template SS confidence
		339	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions