Job Description P0AGF6 Confidence 99.97% Date Thu Jan 5 11:28:58 GMT 2012 Rank 39 Aligned Residues 317 % Identity 15% Template d1kl7a_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70													.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	A	I	D	D	I	I	E	A	K	Q	R	L	A	G	R	I	Y	K	T	G	M	P	R	S	N	Y	F	S	E	R	C	K	G	E	I	F	L	K	F	E	N	M	Q	R	T	G	S	F	K	I	R	G	A	F	N	K	L	S	S	L	T	.	.	.	.	.	.	.	.	.	.	.	.	D	A	E	K	R
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	I	P	D	A	D	L	K	D	L	I	K	R	S	Y	S	T	F	R	S	D	E	V	T	P	L	V	Q	N	V	T	G	D	K	E	N	L	H	I	L	E	L	F	H	G	P	T	Y	A	F	K	D	V	A	L	Q	F	V	G	N	L	F	E	Y	F	L	Q	R	T	N	A	N	L	P	E	G	E	K	K	Q
Template Known Secondary structure		T	S													T	T	T		S	S	T	T	S	S						T	T		S	S	S										S	T	T	S	B	T																					T	T	S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																				.																.																.	.	.																									.	.	.
Query SS confidence																				.																.																.	.	.																									.	.	.
Query Sequence		K	G	V	V	A	C	S	A	G	N	H	A	Q	G	V	S	L	S	.	C	A	M	L	G	I	D	G	K	V	V	M	P	K	G	.	A	P	K	S	K	V	A	A	T	C	D	Y	S	A	E	.	.	.	V	V	L	H	G	D	N	F	N	D	T	I	A	K	V	S	E	I	V	E	M	E	G	R	.	.	.
Query Conservation																				.																.																.	.	.																									.	.	.
Alig confidence																				.																.																.	.	.																									.	.	.
Template Conservation
Template Sequence		I	T	V	V	G	A	T	S	G	D	T	G	S	A	A	I	Y	G	L	R	G	K	K	D	V	S	V	F	I	L	Y	P	T	G	R	I	S	P	I	Q	E	E	Q	X	T	T	V	P	D	E	N	V	Q	T	L	S	V	T	G	T	F	D	N	C	Q	D	I	V	K	A	I	F	G	D	K	E	F	N	H	N
Template Known Secondary structure									S	S	S										T	T		T	T									T	T	S	S														T	T							S	S																S	S
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.						.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		I	F	I	P	P	Y	D	D	P	K	V	I	A	G	Q	G	T	I	G	L	E	I	M	E	D	L	.	.	.	.	.	Y	D	V	D	N	V	I	V	P	I	G	G	G	G	L	I	A	G	I	A	V	A	I	K	S	I	N	P	T	I	R	V	I	G	V	Q	S	E	N	V	H	G	M	A	A	S	F	H	S
Query Conservation																												.	.	.	.	.
Alig confidence																												.	.	.	.	.																																								.
Template Conservation																																																																								.
Template Sequence		V	G	A	V	N	S	I	N	W	A	R	I	L	A	Q	X	T	Y	Y	F	Y	S	F	F	Q	A	T	N	G	K	D	S	K	K	V	K	F	V	V	P	S	G	N	F	G	D	I	L	A	G	Y	F	A	K	K	X	G	L	P	I	E	K	L	A	I	A	T	N	E	N	.	D	I	L	D	R	F	L	K	S
Template Known Secondary structure		B					S																						S	S	S	S											S	S	S													T												S		.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.		.	.	.	.	310	.	.	.	.
		223	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.																																										.	.	.	260
Predicted Secondary structure											.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	I	T	T	H	R	T	T	.	G	T	L	A	D	G	C	D	V	S	R	P	G	N	L	T	Y	E	I	V	R	E	L	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I	V	L
Query Conservation											.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	Y	E	R	S	D	K	V	A	A	T	L	S	P	A	X	D	I	L	I	S	S	N	F	E	R	L	L	W	Y	L	A	R	E	Y	L	A	N	G	D	D	L	K	A	G	E	I	V	N	N	W	F	Q	E	L	K	T	N	G	K	F	Q	V	D	K	S	I	I	E	G	A	S	K	D	F	T	S	E	R
Template Known Secondary structure		S						S	S					S		G	G	G			S	S		T	T													T	S	T	T																				S													T	T	T
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.					.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.																																				.
Query SS confidence																			.	.	.	.																																				.
Query Sequence		V	S	E	D	E	I	R	N	S	M	I	A	L	I	Q	R	N	.	.	.	.	K	V	V	T	E	G	A	G	A	L	A	C	A	A	L	L	S	G	K	L	D	Q	Y	I	Q	N	R	K	T	V	S	I	I	S	G	.	G	N	I	D	L	S	R	V	S	Q	I	T	G
Query Conservation																			.	.	.	.																																				.
Alig confidence																			.	.	.	.																																				.
Template Conservation
Template Sequence		V	S	N	E	E	T	S	E	T	I	K	K	I	Y	E	S	S	V	N	P	K	H	Y	I	L	D	P	H	T	A	V	G	V	C	A	T	E	R	L	I	A	K	D	N	D	K	S	I	Q	Y	I	S	L	S	T	A	H	P	A	K	F	A	D	A	V	N	N	A	L	S
Template Known Secondary structure																				S	S	T	T																								T	T	S								B		G	G	G	G									T
Template Predicted Secondary structure
Template SS confidence
		395	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions