Job Description P0AGF6 Confidence 100.00% Date Thu Jan 5 11:28:58 GMT 2012 Rank 36 Aligned Residues 296 % Identity 15% Template d1f2da_ SCOP info Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Tryptophan synthase beta subunit-like PLP-dependent enzymes Resolution 2.00

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.				.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																									.	.																.	.	.																								.
Query SS confidence																									.	.																.	.	.																								.
Query Sequence		R	L	A	G	R	I	Y	K	T	G	M	P	R	S	N	Y	F	S	E	R	C	K	G	.	.	E	I	F	L	K	F	E	N	M	Q	R	T	G	S	F	.	.	.	K	I	R	G	A	F	N	K	L	S	S	L	T	D	A	E	K	R	K	G	V	V	A	.	C	S	A	G	N	H	A	Q	G	V	S	L	S
Query Conservation																									.	.																.	.	.																								.
Alig confidence																									.	.																.	.	.																								.
Template Conservation
Template Sequence		K	Y	P	L	T	F	G	P	S	P	I	S	N	L	N	R	L	S	Q	H	L	G	S	K	V	N	V	Y	A	K	R	E	D	C	N	S	G	L	A	F	G	G	N	K	L	R	K	L	E	Y	I	V	P	D	I	V	E	G	D	Y	T	H	L	V	S	I	G	G	R	Q	S	N	Q	T	R	M	V	A	A	L
Template Known Secondary structure						S	S	S	S													T	T	T		S							G	G	G	S		S	S	T	T									T	T	T							S			S								T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.												.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.						.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.				.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.																					.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.																					.	.	.
Query Sequence		C	A	M	L	G	I	D	G	K	V	V	M	P	K	G	A	P	K	S	K	V	A	.	.	.	.	.	.	.	.	.	.	.	A	T	C	D	Y	S	A	E	V	V	L	H	G	D	N	F	N	.	.	.	.	.	D	T	I	A	K	V	S	E	I	V	E	M	E	G	R	I	F	I	P	P	.	.	.	Y	D
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.																					.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.																					.	.	.
Template Conservation
Template Sequence		A	A	K	L	G	K	K	C	V	L	I	Q	E	D	W	V	P	I	P	E	A	E	K	D	V	Y	N	R	V	G	N	I	E	L	S	R	I	M	G	A	D	V	R	V	I	E	D	G	F	D	I	G	M	R	K	S	F	A	N	A	L	Q	E	L	E	D	A	G	H	K	P	Y	P	I	P	A	G	C	S	E
Template Known Secondary structure						T											S				G	G	G	T	T	T	T	T	T	S									T	T												S	S															T	T								G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.					.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		D	P	K	V	I	A	G	Q	G	T	I	G	L	E	I	M	E	D	L	.	.	.	.	Y	D	V	D	N	V	I	V	P	I	G	G	G	G	L	I	A	G	I	A	V	A	I	K	S	I	N	P	T	I	R	V	I	G	V	Q	S	E	N	V	H	G	M	A	A	S	F	H	S	G	E	I	T	T	H	R	T
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.																																																			.	.	.	.	.	.
Template Conservation																																																																											.	.	.	.	.	.
Template Sequence		H	K	Y	G	G	L	G	F	V	G	F	A	D	E	V	I	N	Q	E	V	E	L	G	I	K	F	D	K	I	V	V	C	C	V	T	G	S	T	T	A	G	I	L	A	G	M	A	Q	Y	G	R	Q	D	D	V	I	A	I	D	A	S	F	T	S	E	K	T	K	E	Q	T	L	R	.	.	.	.	.	.	I
Template Known Secondary structure		S	T	T	T	T	T																	T				S							S	S	S											G	G	G	T		G	G	G							S	S												.	.	.	.	.	.
Template Predicted Secondary structure																																																																											.	.	.	.	.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240							.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.
Predicted Secondary structure																																																								.																			.
Query SS confidence																																																								.																			.
Query Sequence		T	G	T	L	A	D	G	C	D	V	S	R	P	G	N	L	T	Y	E	I	V	R	E	L	V	D	D	I	V	L	V	S	E	D	E	I	R	N	S	M	I	A	L	I	Q	R	N	K	V	V	T	E	G	A	.	G	A	L	A	C	A	A	L	L	S	G	K	L	D	Q	Y	I	Q	.	N	R	K	T	V	S
Query Conservation																																																								.																			.
Alig confidence																		.																																						.																			.
Template Conservation																		.
Template Sequence		A	N	N	T	A	K	L	I	G	V	E	H	E	F	K	D	.	F	T	L	D	T	R	F	A	Y	P	C	Y	G	V	P	N	E	G	T	I	E	A	I	R	T	C	A	E	Q	E	G	V	L	T	D	P	V	Y	E	G	K	S	M	Q	G	L	I	A	L	I	K	E	D	Y	F	K	P	G	A	N	V	L	Y
Template Known Secondary structure										T						S		.						T	T	S	T	T	B	T	T	B																	S					T	T	T														T	T		S		T	T
Template Predicted Secondary structure																		.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.		.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
		309	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	S	G	G	N	I	D	L	S	R	V	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	H	L	G	G	A	P	A	L	S	A	Y	S	S
Template Known Secondary structure							G	G	G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		321	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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