Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGF6
Confidence44.86%DateThu Jan 5 11:28:58 GMT 2012
Rank120Aligned Residues85
% Identity14%Templatec3o93A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:nicotinamidase; PDBTitle: high resolution crystal structures of streptococcus pneumoniae2 nicotinamidase with trapped intermediates provide insights into3 catalytic mechanism and inhibition by aldehydes
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50.........60.........70.........80.........90.........100.........110
Predicted Secondary structure 


























...
Query SS confidence 












































































. . .
Query Sequence  NYFSERCKGEIFLKFENMQRTGSFKIRGAFNKLSSLTDAEKRKGVVACSAGNHAQGVSLSCAMLGIDGKVVMPKGAP. . .
Query Conservation    
    
  
  
 
  




 
 
 
   
           

  



 
 


  
   
    

 
    ...
Alig confidence 






















.......














































...
Template Conservation            
  
   


  
....... 
   
   

  


 
  
  

 

  
   
  
 

 

  
   
Template Sequence  QEHGSDSRVFWMDKRHYSAFSGT. . . . . . . DLDIRLRERRVSTVILTGVLTDIVLHTAIDAYNLGYDIEIVKPAVASIWP
Template Known Secondary structure  TTSTTSSSSSSTTS.......STT


TT

TT

SS
Template Predicted Secondary structure 















.......














Template SS confidence 















































































   90.........100.........110.. .......120.........130.........140.........150.........160..
 
   111........ 120.....
Predicted Secondary structure  ....


Query SS confidence  . . .








.





Query Sequence  . . . KSKVAATCD. YSAEVV
Query Conservation  ...      
  . 

 
 
Alig confidence  ...








.





Template Conservation    
  

  
    
  
 
Template Sequence  ENHQFALGHFKNTLGAKLV
Template Known Secondary structure  TS

Template Predicted Secondary structure 


Template SS confidence 


















   164.....170.........180..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions