Job Description P0AGF6 Confidence 100.00% Date Thu Jan 5 11:28:58 GMT 2012 Rank 11 Aligned Residues 306 % Identity 23% Template c2rkbE_ PDB info PDB header:lyase Chain: E: PDB Molecule:serine dehydratase-like; PDBTitle: serine dehydratase like-1 from human cancer cells Resolution 2.80 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	R	I	Y	K	T	G	M	P	R	S	N	Y	F	S	E	R	C	K	G	E	I	F	L	K	F	E	N	M	Q	R	T	G	S	F	K	I	R	G	A	F	N	K	L	S	S	L	T	D	A	E	K	R	K	G	V	V	A	C	S	A	G	N	H	A	Q	G	V	S	L	S	C	A	M	L	G	I	D	G
Query Conservation
Alig confidence																																																								.
Template Conservation																																																								.
Template Sequence		E	P	F	H	V	V	T	P	L	L	E	S	W	A	L	S	Q	V	A	G	M	P	V	F	L	K	C	E	N	V	Q	P	S	G	S	F	K	I	R	G	I	G	H	F	C	Q	E	M	A	K	K	G	C	R	.	H	L	V	C	S	S	G	G	N	A	G	I	A	A	A	Y	A	A	R	K	L	G	I	P	A
Template Known Secondary structure				S	S																T	S							G	G	G	S	T	T	S	B	T															T	T			.								S														T
Template Predicted Secondary structure																																																								.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		K	V	V	M	P	K	G	A	P	K	S	K	V	A	A	T	C	D	Y	S	A	E	V	V	L	H	G	D	N	F	N	D	T	I	A	K	V	S	E	I	V	E	M	E	G	R	I	F	I	P	P	Y	D	D	P	K	V	I	A	G	Q	G	T	I	G	L	E	I	M	E	D	L	Y	D	.	V	D	N	V	I
Query Conservation																																																																												.
Alig confidence																																																																												.
Template Conservation
Template Sequence		T	I	V	L	P	E	S	T	S	L	Q	V	V	Q	R	L	Q	G	E	G	A	E	V	Q	L	T	G	K	V	W	D	E	A	N	L	R	A	Q	E	L	A	K	R	D	G	W	E	N	V	P	P	F	D	H	P	L	I	W	K	G	H	A	S	L	V	Q	E	L	K	A	V	L	R	T	P	P	G	A	L	V
Template Known Secondary structure							T	T												T	T								S	S														S	T	T						S	S		S																		S	S	S			S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		V	P	I	G	G	G	G	L	I	A	G	I	A	V	A	I	K	S	I	N	.	P	T	I	R	V	I	G	V	Q	S	E	N	V	H	G	M	A	A	S	F	H	S	G	E	I	T	T	H	R	T	T	G	T	L	A	D	G	C	D	V	S	R	P	G	N	L	T	Y	E	I	V	R	E	L	V	D	D	I	V
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		L	A	V	G	G	G	G	L	L	A	G	V	V	A	G	L	L	E	V	G	W	Q	H	V	P	I	I	A	M	E	T	H	G	A	H	C	F	N	A	A	I	T	A	G	K	L	V	T	L	P	D	I	T	S	V	A	K	S	L	G	A	K	T	V	A	A	R	A	L	E	C	M	Q	V	C	K	I	H	S	E
Template Known Secondary structure					S	S	S														T		T	T	S								T	T	B										T	S					S				S	S		G	G	G			S	S								G	G	G	T	S
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.								.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.																					.
Query SS confidence																																					.	.	.	.	.	.	.																					.
Query Sequence		L	V	S	E	D	E	I	R	N	S	M	I	A	L	I	Q	R	N	K	V	V	T	E	G	A	G	A	L	A	C	A	A	L	L	S	.	.	.	.	.	.	.	G	K	L	D	Q	Y	I	Q	N	R	K	T	V	S	I	I	S	G	G	N	.	I	D	L	S	R	V	S	Q	I	T	G	F	V	D
Query Conservation																																					.	.	.	.	.	.	.																					.
Alig confidence																																					.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		V	V	E	D	T	E	A	V	S	A	V	Q	Q	L	L	D	D	E	R	M	L	V	E	P	A	C	G	A	A	L	A	A	I	Y	S	G	L	L	R	R	L	Q	A	E	G	C	L	P	P	S	L	T	S	V	V	V	I	V	C	G	G	N	N	I	N	S	R	E	L	Q	A	L	K	T	H	L	G
Template Known Secondary structure																																				T	S								T	T	S	S		S	S		S								B		S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions