Job Description P0AGF6 Confidence 100.00% Date Thu Jan 5 11:28:58 GMT 2012 Rank 18 Aligned Residues 292 % Identity 22% Template c1jbqD_ PDB info PDB header:lyase Chain: D: PDB Molecule:cystathionine beta-synthase; PDBTitle: structure of human cystathionine beta-synthase: a unique pyridoxal 5'-2 phosphate dependent hemeprotein Resolution 2.60 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.				.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																								.	.																																		.	.	.
Query SS confidence																								.	.																																		.	.	.
Query Sequence		R	L	A	G	R	I	Y	K	T	G	M	P	R	S	N	Y	F	S	E	R	C	K	.	.	G	E	I	F	L	K	F	E	N	M	Q	R	T	G	S	F	K	I	R	G	A	F	N	K	L	S	S	L	T	D	A	E	K	.	.	.	R	K	G	V	V	A	C	S	A	G	N	H	A	Q	G	V	S	L	S	C
Query Conservation																								.	.																																		.	.	.
Alig confidence																								.	.																																		.	.	.
Template Conservation
Template Sequence		D	I	L	K	K	I	G	D	T	P	M	V	R	I	N	K	I	G	K	K	F	G	L	K	C	E	L	L	A	K	C	E	F	F	N	A	G	G	S	V	K	D	R	I	S	L	R	M	I	E	D	A	E	R	D	G	T	L	K	P	G	D	T	I	I	E	P	T	S	G	N	T	G	I	G	L	A	L	A	A
Template Known Secondary structure		S	G	G	G	G	S	S									S					T	T			S							G	G	G	S	T	T	S	B	T																T		S		T	T								S	S
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160		.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																																																																				.
Query SS confidence																																																																				.
Query Sequence		A	M	L	G	I	D	G	K	V	V	M	P	K	G	A	P	K	S	K	V	A	A	T	C	D	Y	S	A	E	V	V	L	H	G	D	N	F	N	D	T	I	A	K	V	S	E	I	V	E	M	E	G	R	I	F	I	P	P	Y	D	D	P	K	V	I	A	.	G	Q	G	T	I	G	L	E	I	M	E	D	L
Query Conservation																																																																				.
Alig confidence																																						.																														.
Template Conservation																																						.
Template Sequence		A	V	R	G	Y	R	C	I	I	V	M	P	E	K	M	S	S	E	K	V	D	V	L	R	A	L	G	A	E	I	V	R	T	P	T	E	.	S	H	V	G	V	A	W	R	L	K	N	E	I	P	N	S	H	I	L	D	Q	Y	R	N	A	S	N	P	L	A	H	Y	D	T	T	A	D	E	I	L	Q	Q	C
Template Known Secondary structure					T									S													T	T										.													S	T	T						T	T	T		T									T
Template Predicted Secondary structure																																						.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		174		.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		Y	.	D	V	D	N	V	I	V	P	I	G	G	G	G	L	I	A	G	I	A	V	A	I	K	S	I	N	P	T	I	R	V	I	G	V	Q	S	E	N	V	H	G	M	A	A	S	F	H	S	G	E	I	T	T	H	R	T	T	G	T	L	A	D	G	C	D	V	S	R	P	G	N	L	T	Y	E	I	V	R
Query Conservation			.
Alig confidence			.																																																						.	.	.	.																.	.	.
Template Conservation																																																									.	.	.	.																.	.	.
Template Sequence		D	G	K	L	D	M	L	V	A	S	V	G	T	G	G	T	I	T	G	I	A	R	K	L	K	E	K	C	P	G	C	R	I	I	G	V	D	P	E	G	S	I	L	A	E	P	E	E	L	N	Q	T	E	Q	T	.	.	.	.	T	Y	E	V	E	G	I	G	Y	D	F	I	P	T	V	.	.	.	L	D	R
Template Known Secondary structure		T	T										S	S	S															T	T									T	T		S		S	S	S	G	G	G	G			S			.	.	.	.			S			S				S	S			T	T	.	.	.			G
Template Predicted Secondary structure																																																									.	.	.	.																.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.					300	.	.	.	.	.	.	.	.	.	310	.	.	.	.				.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.		.	.	.	.	.	.	.	320
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		E	L	V	D	D	I	V	L	V	S	E	D	E	I	R	N	S	M	I	A	L	I	Q	R	N	K	V	V	T	E	G	A	G	A	L	A	C	A	A	L	L	S	G	K	L	D	Q	Y	I	Q	N	R	K	T	V	S	I	I	S	G	.	G	N	I	D	L	S	R	V
Query Conservation																																																														.
Alig confidence																																														.																.
Template Conservation																																														.
Template Sequence		T	V	V	D	K	W	F	K	S	N	D	E	E	A	F	T	F	A	R	M	L	I	A	Q	E	G	L	L	C	G	G	S	A	G	S	T	V	A	V	A	V	K	A	A	.	Q	E	L	Q	E	G	Q	R	C	V	V	I	L	P	D	S	V	R	N	Y	M	T	K	F
Template Known Secondary structure		G	G																							T				B															G	.	G	G			T	T									B	B	G	G	G	G	T	T	T	T
Template Predicted Secondary structure																																														.
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.		.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions