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5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
P | A | V | E | V | R | L | D | K | W | L | W | A | A | R | F | Y | K | T | R | A | L | A | R | E | M | I | E | G | G | K | V | H | Y | N | G | Q | R | S | K | P | S | K | I | V | E | L | N | A | T | L | T | L | R | Q | G | N | D | E | R | T | V | I | V | K | A | I | T | E | Q | R | R | P | A | S | E | A | A | L | L |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | A | V | E | V | R | L | D | K | W | L | W | A | A | R | F | Y | K | T | R | A | L | A | R | E | M | I | E | G | G | K | V | H | Y | N | G | Q | R | S | K | P | S | K | I | V | E | L | N | A | T | L | T | L | R | Q | G | N | D | E | R | T | V | I | V | K | A | I | T | E | Q | R | R | P | A | S | E | A | A | L | L |
Template Known Secondary structure |   |
| T | T |
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| B |  |  |  |  |  |  |  | T | T | S | S | S | S |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  | T | T |  |  |
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| T | T |
| B |
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| T | T |
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| S |
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|  |  |  |  | G | G | G |
Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . |
  |
  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |
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Query SS confidence |   |
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Query Sequence |   |
Y | E | E | T | A | E | S | V | E | K | R | E | K | M | A | L | A | R | K | L | N | A | L | T |
Query Conservation |   |
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|   |   |   |   |   |   |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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Template Conservation |   |
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|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
Y | E | E | T | A | E | S | V | E | K | R | E | K | M | A | L | A | R | K | L | N | A | L | T |
Template Known Secondary structure |   |
 |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
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Template Predicted Secondary structure |   |
 |  |
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|  |  |  |  |  |  |  |  |  |  |  |  |
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Template SS confidence |   |
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  |   |
85 | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
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