Job Description P0ACG8 Confidence 93.41% Date Thu Jan 5 11:18:09 GMT 2012 Rank 24 Aligned Residues 64 % Identity 9% Template c2xzmW_ PDB info PDB header:ribosome Chain: W: PDB Molecule:40s ribosomal protein s4; PDBTitle: crystal structure of the eukaryotic 40s ribosomal2 subunit in complex with initiation factor 1. this file3 contains the 40s subunit and initiation factor for4 molecule 1 Resolution 3.93 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																.																.	.														.
Query SS confidence																.																.	.														.
Query Sequence		E	K	P	A	V	E	V	R	L	D	K	W	L	W	.	A	A	R	F	Y	K	T	R	A	L	A	R	E	M	I	.	.	E	G	G	K	V	H	Y	N	G	Q	R	S	K	.	P	S	K	I	V	E	L	N	A	T	L	T	L	R	Q	G	N	D	E	R	T	V
Query Conservation																.																.	.														.
Alig confidence																.																.	.														.
Template Conservation
Template Sequence		H	K	L	R	E	S	L	P	L	S	V	L	L	K	E	R	L	N	Y	A	L	N	G	R	D	V	T	L	I	L	N	D	K	E	Q	N	V	F	V	D	G	K	V	R	R	D	K	G	Y	P	T	G	L	M	D	V	V	R	I	E	K	T	D	Q	S	F	R	I
Template Known Secondary structure		S		S	S	S									T	T	T	T		S			S								T	T	S	T	T						T	T						T	T					T	T						G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions