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Job DescriptionP0A796
Confidence91.79%DateThu Jan 5 11:05:08 GMT 2012
Rank55Aligned Residues241
% Identity12%Templatec3rotA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:abc sugar transporter, periplasmic sugar binding protein; PDBTitle: crystal structure of abc sugar transporter (periplasmic sugar binding2 protein) from legionella pneumophila
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  KKIGVLTSGGDAPGMNAAIRGVVRSALTEGLEVMGIYDGYLGLYEDRMVQLDRYSVSDMINRGGTFLGSARFPEFRDENI
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Template Sequence  DKYYLITHGSQDPYWTSLFQGAKKAAEELKVDLQILA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PPGANDVPK
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   23......30.........40.........50......... 60........
 
   83......90.........100.... .....110.........120.........130.........140.........150.........160
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Query Sequence  RAVAIENLKKRGIDALVVIGGD. . GSYMGAMRLTEMGFPCIGLPGTIDNDIKGTDYTIGFFTALSTVVEAIDRLRDTSSS
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Template Sequence  QVQFIESALATYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRPKDKTKNPYLVFLGSDNLLAGKKLGEKALELTPS
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   6970.........80.........90.........100.........110.........120.........130.........140........
 
   161........170......... 180.........190.........200.........210.........220.........230......
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Query Sequence  HQRISVVEVMGRYCGDLTL. . . . AAAIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAIVAITEHMCDVDELAHFIE
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Template Sequence  AKRALVLNPQPGHIGLEKRAYGIKTILQDKGIFFEELDVGTDPNQVQSRVKSYFKI. HPETNIIFCLTSQALDPLGQXLL
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   149150.........160.........170.........180.........190.........200.... .....210.........220.......
 
   237. .240.........250. ........260.........270........
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Query Sequence  KE. . TGRETRATVLGHI. . . . . . . . QRGGSPVPYDRILASRMGAYAIDLLLA
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Template Sequence  HPDRYDFNYQPQVYSFDKTPNTVSLIHKKLVNYVXDQQPFLXGYLSITQLVL
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   228.230.........240.........250.........260.........270.........
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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