Job Description P0A796 Confidence 45.64% Date Thu Jan 5 11:05:08 GMT 2012 Rank 135 Aligned Residues 110 % Identity 12% Template c3lm8D_ PDB info PDB header:transferase Chain: D: PDB Molecule:thiamine pyrophosphokinase; PDBTitle: crystal structure of thiamine pyrophosphokinase from2 bacillus subtilis, northeast structural genomics consortium3 target sr677 Resolution 2.60 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.										.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.
Query Sequence		K	I	G	V	L	T	S	G	G	D	A	P	G	M	N	A	A	I	R	G	V	V	R	S	A	L	T	E	G	L	E	V	M	G	I	Y	D	G	Y	L	G	L	Y	E	D	R	M	V	Q	.	.	.	.	.	.	.	.	.	L	D	R	Y	S	V	S	D	M	I	N	R	G	G	T	F	L	G	S	A	R	F
Query Conservation																																																			.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.																													.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation																		.	.	.	.	.																																																	.	.	.	.	.
Template Sequence		K	T	I	N	I	V	A	G	G	P	K	N	L	I	P	D	.	.	.	.	.	L	T	G	Y	T	D	E	H	T	L	W	I	G	V	D	K	G	T	V	T	L	L	D	A	G	I	I	P	V	E	A	F	G	D	F	D	S	I	T	E	Q	E	R	R	R	I	E	K	.	.	.	.	.	A	A	P	A	L	H
Template Known Secondary structure									S	S		G	G	G	S			.	.	.	.	.	G	G	G	G			T	T							T								T	T	T				S				S		S	T	T												.	.	.	.	.			T	T
Template Predicted Secondary structure																		.	.	.	.	.																																																	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.						.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.									.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.
Query Sequence		P	E	F	R	D	E	N	I	R	A	V	A	I	E	N	L	K	K	R	G	I	D	A	L	V	V	I	G	G	D	G	S	.	.	.	.	.	.	.	.	Y	M	G	A	M	R	L	T	E	M	G	F	P	C	I	G	L
Query Conservation																																		.	.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	Y	Q	A	D	Q	T	D	L	D	L	A	L	D	W	A	L	E	K	Q	P	D	I	I	Q	I	F	G	I	T	G	G	R	A	D	H	F	L	G	N	I	Q	L	L	Y	K	G	V	K	T	N	I	K	I	R	L	I
Template Known Secondary structure																				T			S						S				S																	T	T	T
Template Predicted Secondary structure
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions