 |
Job Description | P0A796 | Confidence | 92.02% | Date | Thu Jan 5 11:05:08 GMT 2012 |
Rank | 54 | Aligned Residues | 82 |
% Identity | 15% | Template | c1ta9A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:glycerol dehydrogenase; |
PDBTitle: crystal structure of glycerol dehydrogenase from schizosaccharomyces2 pombe
|
Resolution | 1.90 Å |
|
 |
  |   |
56 | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | |
. | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | S | V | S | D | M | I | N | R | G | G | T | F | L | G | S | A | R | F | P | E | F | R | D | E | N | I | R | A | V | A | I | E | N | L | K | K | R | G | I | D | A | L | V | V | I | G | G | D | G | S | Y | M | G | A | M | R | L | T | E | M | . |
G | F | P | C | I | G | L | P | G | T | I | D | N | D | I | K | G | T |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |
|   |
|   | . |   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   | . |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
|   |
|
|   |
|
|   |
|
|   |   |   |   |   |
|   |
|   |
|
|
|
|
|   |
|
|
|
|   |
|
Template Sequence |   |
N | K | I | V | D | S | L | S | Q | N | G | M | T | V | T | K | L | V | F | G | G | E | A | S | L | V | E | L | D | K | L | R | K | . |
Q | C | P | D | D | T | Q | V | I | I | G | V | G | G | G | K | T | M | D | S | A | K | Y | I | A | H | S | M | N | L | P | S | I | I | C | P | T | T | A | S | S | D | A | A | T | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |
| S |
|
|
|  |  |  |  |  |  |  |  | T | . | T | S |
| T | T |
|
|  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  | S | S |
| S |
| S |
| T | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | |
. | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . |
  |
  |   |
135 | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
Query SS confidence |   |
|
|
|
|
Query Sequence |   |
D | Y | T | I |
Query Conservation |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
Template Conservation |   |
  |   |
|
|
Template Sequence |   |
S | L | S | V |
Template Known Secondary structure |   |
S |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |
Template SS confidence |   |
|
|
|
|
  |   |
187 | . | . | 190 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|