 |
Job Description | P23865 | Confidence | 98.58% | Date | Thu Jan 5 11:40:05 GMT 2012 |
Rank | 160 | Aligned Residues | 90 |
% Identity | 10% | Template | d2i4sa1 |
SCOP info | PDZ domain-like
| PDZ domain-like
| EpsC C-terminal domain-like
|
Resolution | 1.92 |
|
 |
  |   |
235 | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | |
|
|
. | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | Q | F | N | T | E | M | S | L | S | L | E | G | I | G | A | V | L | Q | M | D | D | D | . |
. |
. |
Y | T | V | I | N | S | M | V | A | G | G | P | A | A | K | S | K | A | I | S | V | G | D | K | I | V | G | V | G | Q | T | G | K | P | M | V | D | V | I | G | W | R | L | D | D | V | V | A | L | I | K | G | P | K |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|   |   |   |
|
|
|   |   |
|   |   |   |   |   | . | . | . |   |   |   |
|   |   |
|   |   |
|
|
|
|   |
|
|
|   |
|
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|   |   |
|
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|   |   |   |
|   |
|   |
|   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |
|   |   |
|
| . |
|   |   |
|
|
|
|   |   |
|
| . | . | . | . | . |
|   |   |
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
E | A | I | A | R | N | P | Q | E | I | F | Q | Y | V | R | L | S | Q | V | K | R | D | D | K | V | L | G | Y | R | V | S | P | G | K | D | P | V | L | F | E | S | I | G | . |
L | Q | D | G | D | X | A | V | A | L | N | . |
. |
. |
. |
. |
G | L | D | L | T | D | P | N | . |
V | X | N | T | L | F | Q | S | X | N | E |
Template Known Secondary structure |   |
 |  |  |  |  | S | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
| S |
| T |  |  |  |  |  |  | T | . |
|
| T | T |
|  |  |  |  |  | T | . | . | . | . | . | T |  |  | T | T | S | T | T | . |  |  |  |  |  |  |  |  |  | T | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
| . |
|
|
|
|
|
|  |  |  |  |
| . | . | . | . | . |
|  |  |
|
|
|  |  | . |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
212 | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | |
. | . | . | . | . | 260 | . | . | . | . | . | |
|
|
|
|
. | . | . | . | 270 | . | . | . | |
. | . | . | . | . | . | 280 | . | . | . | . |
  |
  |   |
312 | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | S | K | V | R | L | E | I | L | P | A | G | K | G | T | K | T | R | T | V | T | L | T |
Query Conservation |   |
|
|   |
|   |
|
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |
|   |
| . | . | . |   |
|   |   |   |   |
|   |
|   |
Template Sequence |   |
X | T | E | X | S | L | T | V | E | R | . |
. |
. |
D | G | Q | Q | H | D | V | Y | I | Q |
Template Known Secondary structure |   |
| S |  |  |  |  |  |  |  |  | . | . | . | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  | . | . | . |
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
285 | . | . | . | . | 290 | . | . | . | . | |
|
|
. | . | . | . | . | 300 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|