Return to main results Retrieve Phyre Job Id

Job DescriptionP23865
Confidence98.94%DateThu Jan 5 11:40:05 GMT 2012
Rank30Aligned Residues72
% Identity26%Templated2fe5a1
SCOP infoPDZ domain-like PDZ domain-like PDZ domain
Resolution1.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   247..250... ......260.........270.........280.........290.........300.........310........
Predicted Secondary structure  ........

































Query SS confidence 






. . . . . . . .
































































Query Sequence  GIGAVLQ. . . . . . . . MDDDYTVINSMVAGGPAAKSKAISVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLE
Query Conservation 


  
 ........       
  
  



 


 

 

 



         
 
  
  
  



  

 
 

Alig confidence 






........
































.....


















.






Template Conservation 


  
              
 
  
  

 
   
 
  

 

 

.....
  
   
   
   
   .   
 
 
Template Sequence  GLGFSIAGGIGNQHIPGDNSIYITKIIEGGAAQKDGRLQIGDRLLAVN. . . . . NTNLQDVRHEEAVASLKNT. SDMVYLK
Template Known Secondary structure 
S

BTS
SBTTB


TTS



TT
T.....T
TT
BT
.
S
Template Predicted Secondary structure 


























.....







.

Template SS confidence 















































































   235....240.........250.........260.........270.........280.. .......290.........300. .......
 
   319320....
Predicted Secondary structure 


Query SS confidence 





Query Sequence  ILPAGK
Query Conservation 
 
   
Alig confidence 





Template Conservation 
 
  
Template Sequence  VAKPGS
Template Known Secondary structure 



Template Predicted Secondary structure 


Template SS confidence 





   309310....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions