Return to main results Retrieve Phyre Job Id

Job DescriptionP23865
Confidence98.77%DateThu Jan 5 11:40:05 GMT 2012
Rank102Aligned Residues71
% Identity17%Templated2cssa1
SCOP infoPDZ domain-like PDZ domain-like PDZ domain
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  GIGAVLQMDDD. . . . . . YTVINSMVAGGPAAKSKAISVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPK. GSKVRLEI
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Template Sequence  LLGLKVVGGKMTDLGRLGAFITKVKKGSLADVVGHLRAGDEVLEWN. . . . . GKPLPGATNEEVYNIILESKSEPQVEIIV
Template Known Secondary structure 
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   38.40.........50.........60.........70.........80... ......90.........100.........110..
 
   320..
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Query Sequence  LPA
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Template Sequence  SRP
Template Known Secondary structure 
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   113..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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