Job Description P23865 Confidence 98.28% Date Thu Jan 5 11:40:05 GMT 2012 Rank 199 Aligned Residues 66 % Identity 21% Template c4a8aI_ PDB info PDB header:hydrolase/hydrolase Chain: I: PDB Molecule:periplasmic ph-dependent serine endoprotease degq; PDBTitle: asymmetric cryo-em reconstruction of e. coli degq 12-mer in complex2 with lysozyme Resolution 14.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	Y	T	V	I	N	S	M	V	A	G	G	P	A	A	K	S	K	A	I	S	V	G	D	K	I	V	G	V	G	Q	T	G	K	P	M	V	D	V	I	G	W	R	L	D	D	V	V	A	L	I	K	G	P	K	G	S	K	V	R	L	E	I	L	P	A	G	K	G	T	K	T	R	T	V	T	L
Query Conservation
Alig confidence																					.												.	.	.	.	.						.	.																.								.	.	.
Template Conservation																					.												.	.	.	.	.						.	.																.								.	.	.
Template Sequence		G	K	G	I	K	I	D	E	V	V	K	G	S	P	A	A	Q	A	G	.	L	Q	K	D	D	V	I	I	G	V	N	.	.	.	.	.	R	D	R	V	N	.	.	S	I	A	E	M	R	K	V	L	A	A	K	P	A	I	.	I	A	L	Q	I	V	R	.	.	.	G	N	E	S	I	Y	L	L	M
Template Known Secondary structure				S		B						S	S	S	S					S	.			T	T							T	.	.	.	.	.	T	B			S	.	.	S													S	S	.								.	.	.	T	T
Template Predicted Secondary structure																					.												.	.	.	.	.						.	.																.								.	.	.
Template SS confidence
		362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380		.	.	.	.	.	.	.	.	.	390	.						.	.	.	.	.			.	.	.	400	.	.	.	.	.	.	.	.	.	410	.		.	.	.	.	.	.	.				.	420	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions