Return to main results Retrieve Phyre Job Id

Job DescriptionP23865
Confidence98.62%DateThu Jan 5 11:40:05 GMT 2012
Rank149Aligned Residues90
% Identity20%Templatec3stjC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:protease degq; PDBTitle: crystal structure of the protease + pdz1 domain of degq from2 escherichia coli
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   234.....240.........250.... .....260.........270.........280.........290.........300.
Predicted Secondary structure 


............



























Query SS confidence 




















. . . . . . . . . . . .














































Query Sequence  TEQFNTEMSLSLEGIGAVLQM. . . . . . . . . . . . DDDYTVINSMVAGGPAAKSKAISVGDKIVGVGQTGKPMVDVIGWRLD
Query Conservation           
   


  
  ............      
  
  



 


 

 

 



         
 
  
 
Alig confidence 




















............



















.















.......


Template Conservation                

                    

 
  
   


  

.
  



  
 
  
 .......   
Template Sequence  AQQLIDFGEIKRGLLGIKGTEMSADIAKAFNLDVQRGAFVSEVLPGSGSAKAG. VKAGDIITSLNGKPLN. . . . . . . SFA
Template Known Secondary structure  SS






TT
S

SS
TTSTT.

TT

TT
S.......
Template Predicted Secondary structure 





















.








.......
Template SS confidence 















































































   228.230.........240.........250.........260.........270.........280 .........290...... ...
 
   302....... 310.........320.........330....
Predicted Secondary structure 

.









Query SS confidence 







.
























Query Sequence  DVVALIKG. PKGSKVRLEILPAGKGTKTRTVTLT
Query Conservation   
  



.  

 
 


 
         
 
 
Alig confidence 







.











...









Template Conservation       
     
  
 
 
 
... 
      
 
Template Sequence  ELRSRIATTEPGTKVKLGLLR. . . NGKPLEVEVT
Template Known Secondary structure  S
TT
...TT
Template Predicted Secondary structure 




...

Template SS confidence 

































   300.........310.........320 .........330
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions