Return to main results Retrieve Phyre Job Id

Job DescriptionP23865
Confidence99.06%DateThu Jan 5 11:40:05 GMT 2012
Rank15Aligned Residues69
% Identity25%Templatec3k1rA_
PDB info PDB header:structural proteinChain: A: PDB Molecule:harmonin; PDBTitle: structure of harmonin npdz1 in complex with the sam-pbm of2 sans
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   247..250........ .260.........270.........280.........290.........300.........310.........320...
Predicted Secondary structure 

...

































Query SS confidence 











. . .
































































Query Sequence  GIGAVLQMDDDY. . . TVINSMVAGGPAAKSKAISVGDKIVGVGQTGKPMVDVIGWRLDDVVALIKGPKGSKVRLEILPAG
Query Conservation 


  
      ...  
  
  



 


 

 

 



         
 
  
  
  



  

 
 


 
  
Alig confidence 











...















.










.....



















..









Template Conservation   


 
 

     

 
  
  
  
   
.
  

 

 

.....
  
      


 


   ..     
    
Template Sequence  GLGLSVRGGLEFGCGLFISHLIKGGQADSVG. LQVGDEIVRIN. . . . . GYSISSCTHEEVINLIRTEK. . TVSIKVRHIG
Template Known Secondary structure 


GGGT
TTSTT.

TTT.....T
TT

TSSS..

Template Predicted Secondary structure 















.




.....








..


Template SS confidence 















































































   97..100.........110.........120....... ..130........ .140.........150........ .160........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions