Return to main results Retrieve Phyre Job Id

Job DescriptionP23865
Confidence98.47%DateThu Jan 5 11:40:05 GMT 2012
Rank188Aligned Residues68
% Identity25%Templatec3bpuA_
PDB info PDB header:transferaseChain: A: PDB Molecule:membrane-associated guanylate kinase, ww and pdz domain- PDBTitle: crystal structure of the 3rd pdz domain of human membrane associated2 guanylate kinase, c677s and c709s double mutant
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   247..250... ......260.........270.........280.........290.........300........ .310.........320...
Predicted Secondary structure  ..




























.






Query SS confidence 






. .






















































.














Query Sequence  GIGAVLQ. . MDDDYTVINSMVAGGPAAKSKAISVGDKIVGVGQTGKPMVDVIGWRLDDVVALIK. GPKGSKVRLEILPAG
Query Conservation 


  
 ..       
  
  



 


 

 

 



         
 
  
  
  


.
  

 
 


 
  
Alig confidence 






..
















.....










.....
















.














Template Conservation 
 

 
       
  
  
      .....
  

 
  

.....
  
        
  

    
  
 
 
 
  
Template Sequence  GFGFTIADSPGGGGQRVKQIVDRSRG. . . . . LKEGDLIVEVN. . . . . KKNVQALTHNQVVDMLVESPKGSEVTLLVQRQT
Template Known Secondary structure  BSS

TTSSS




TT.....

TT
T.....T
TTS
TS
TT

Template Predicted Secondary structure 















.....




.....













Template SS confidence 















































































   652.......660.........670....... ..680........ .690.........700.........710.........720.
 
   324
Predicted Secondary structure 
Query SS confidence 
Query Sequence  K
Query Conservation   
Alig confidence 
Template Conservation   
Template Sequence  R
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   724
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions