Job Description P23865 Confidence 98.44% Date Thu Jan 5 11:40:05 GMT 2012 Rank 192 Aligned Residues 66 % Identity 26% Template c2vspA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:pdz domain-containing protein 1; PDBTitle: crystal structure of the fourth pdz domain of pdz domain-2 containing protein 1 Resolution 2.60 Å

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		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	G	A	V	L	Q	M	D	D	D	Y	T	V	I	N	S	M	V	A	G	G	P	A	A	K	S	K	A	I	S	V	G	D	K	I	V	G	V	G	Q	T	G	K	P	M	V	D	V	I	G	W	R	L	D	D	V	V	A	L	I	K	G	P	K	G	S	K	V	R	L	E	I
Query Conservation
Alig confidence																														.												.	.	.	.	.																			.
Template Conservation																														.												.	.	.	.	.																			.
Template Sequence		G	F	H	L	N	A	I	R	G	L	P	G	S	F	I	K	E	V	Q	K	G	G	P	A	D	L	A	G	.	L	E	D	E	D	V	I	I	E	V	N	.	.	.	.	.	G	V	N	V	L	D	E	P	Y	E	K	V	V	D	R	I	Q	S	.	S	G	K	N	V	T	L	L	V
Template Known Secondary structure		S				B			T	T		S			B		.				T	T	S					T	T	.			T	T							T	.	.	.	.	.	T				T	T	S										T	T	.	S		S
Template Predicted Secondary structure																														.												.	.	.	.	.																			.
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.		.	.	.	420	.	.	.	.	.	.	.						.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.		.	.	.	.	450	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions