Job Description P23865 Confidence 98.77% Date Thu Jan 5 11:40:05 GMT 2012 Rank 99 Aligned Residues 74 % Identity 22% Template c2v1wB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:pdz and lim domain protein 4; PDBTitle: crystal structure of human lim protein ril (pdlim4) pdz2 domain bound to the c-terminal peptide of human alpha-3 actinin-1 Resolution 1.9 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		247	.	.	250	.	.	.	.	.	.				.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure												.	.	.
Query SS confidence												.	.	.
Query Sequence		G	I	G	A	V	L	Q	M	D	D	.	.	.	D	Y	T	V	I	N	S	M	V	A	G	G	P	A	A	K	S	K	A	I	S	V	G	D	K	I	V	G	V	G	Q	T	G	K	P	M	V	D	V	I	G	W	R	L	D	D	V	V	A	L	I	K	G	P	K	G	S	K	V	R	L	E	I	L	P	A	G
Query Conservation												.	.	.
Alig confidence												.	.	.																			.												.	.	.	.	.																			.
Template Conservation																																	.												.	.	.	.	.																			.
Template Sequence		P	W	G	F	R	L	V	G	G	R	D	F	S	A	P	L	T	I	S	R	V	H	A	G	S	K	A	A	L	A	A	.	L	C	P	G	D	L	I	Q	A	I	N	.	.	.	.	.	G	E	S	T	E	L	M	T	H	L	E	A	Q	N	R	I	K	G	.	C	H	D	H	L	T	L	S	V	S	R	P	E
Template Known Secondary structure											G	G	G	T										T	T	S					T	T	.			T	T							T	.	.	.	.	.	T				T	T											T	S	.		S	S										T
Template Predicted Secondary structure																																	.												.	.	.	.	.																			.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.						.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.
		324	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	T	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	S	D
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions