Job Description P23865 Confidence 50.01% Date Thu Jan 5 11:40:05 GMT 2012 Rank 241 Aligned Residues 66 % Identity 12% Template c2jsnA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:trafficking protein particle complex subunit 4; PDBTitle: solution structure of the atypical pdz-like domain of2 synbindin Resolution UNK

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		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	A	V	L	Q	M	D	D	D	Y	T	V	I	N	S	M	V	A	G	G	P	A	A	K	S	K	A	I	S	V	G	D	K	I	V	G	V	G	Q	T	G	K	P	M	V	D	V	I	G	W	R	L	D	D	V	V	A	L	I	K	G	P	K	G	S	K	V	R	L	E	I	L	P	A
Query Conservation
Alig confidence																		.	.	.	.	.	.						.																		.	.
Template Conservation																		.	.	.	.	.	.						.																		.	.
Template Sequence		L	D	L	L	L	K	L	H	D	E	R	V	L	V	A	F	.	.	.	.	.	.	G	Q	R	D	G	.	I	R	V	G	H	A	V	L	A	I	N	G	M	D	V	N	G	.	.	R	Y	T	A	D	G	K	E	V	L	E	Y	L	G	N	P	A	N	Y	P	V	S	I	R	F	G	R	P
Template Known Secondary structure			S							T	T							.	.	.	.	.	.			S	S	S	.	T	T	T	T							T	T				B	T	.	.	T	B		S	S			B							S	G	G	G		S								S
Template Predicted Secondary structure																		.	.	.	.	.	.						.																		.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.							.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions