Job Description P23865 Confidence 98.92% Date Thu Jan 5 11:40:05 GMT 2012 Rank 36 Aligned Residues 74 % Identity 26% Template c2jikB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:synaptojanin-2 binding protein; PDBTitle: crystal structure of pdz domain of synaptojanin-2 binding2 protein Resolution 1.35 Å

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		247	.	.	250	.	.						.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure								.	.	.	.	.
Query SS confidence								.	.	.	.	.
Query Sequence		G	I	G	A	V	L	.	.	.	.	.	Q	M	D	D	D	Y	T	V	I	N	S	M	V	A	G	G	P	A	A	K	S	K	A	I	S	V	G	D	K	I	V	G	V	G	Q	T	G	K	P	M	V	D	V	I	G	W	R	L	D	D	V	V	A	L	I	K	G	P	K	G	S	K	V	R	L	E	I	L	P
Query Conservation								.	.	.	.	.
Alig confidence								.	.	.	.	.																																			.	.	.	.	.																				.
Template Conservation																																															.	.	.	.	.																				.
Template Sequence		G	L	G	F	N	I	V	G	G	T	D	Q	Q	Y	D	S	G	I	Y	V	S	R	I	K	E	N	G	A	A	A	L	D	G	R	L	Q	E	G	D	K	I	L	S	V	N	.	.	.	.	.	G	Q	D	L	K	N	L	L	H	Q	D	A	V	D	L	F	R	N	A	.	G	Y	A	V	S	L	R	V	Q	H
Template Known Secondary structure		B	S							S	T	T	S													T	T	S										T	T							T	.	.	.	.	.	T				S	S												T		.		S
Template Predicted Secondary structure																																															.	.	.	.	.																				.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.						.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.
		322	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	K	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	L	E	S	S
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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