Job Description P23865 Confidence 98.92% Date Thu Jan 5 11:40:05 GMT 2012 Rank 37 Aligned Residues 71 % Identity 32% Template c2he4A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:na(+)/h(+) exchange regulatory cofactor nhe-rf2; PDBTitle: the crystal structure of the second pdz domain of human2 nherf-2 (slc9a3r2) interacting with a mode 1 pdz binding3 motif Resolution 1.45 Å

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		247	.	.	250	.	.	.	.	.	.			.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		G	I	G	A	V	L	Q	M	D	D	.	.	D	Y	T	V	I	N	S	M	V	A	G	G	P	A	A	K	S	K	A	I	S	V	G	D	K	I	V	G	V	G	Q	T	G	K	P	M	V	D	V	I	G	W	R	L	D	D	V	V	A	L	I	K	G	P	K	G	S	K	V	R	L	E	I	L	P	A	G	K
Query Conservation												.	.
Alig confidence												.	.																			.												.	.	.	.	.																			.
Template Conservation																																.												.	.	.	.	.																			.
Template Sequence		G	Y	G	F	N	L	H	S	D	K	S	R	P	G	Q	Y	I	R	S	V	D	P	G	S	P	A	A	R	S	G	.	L	R	A	Q	D	R	L	I	E	V	N	.	.	.	.	.	G	Q	N	V	E	G	L	R	H	A	E	V	V	A	S	I	K	A	.	R	E	D	E	A	R	L	L	V	V	G	P	S	T
Template Known Secondary structure		B									S	S	S	S	S								T	T	S						T	.			T	T							T	.	.	.	.	.	T				T	T	S										T	T	.	S	S	S
Template Predicted Secondary structure																																.												.	.	.	.	.																			.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.	200						.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions