Job Description P23865 Confidence 99.14% Date Thu Jan 5 11:40:05 GMT 2012 Rank 12 Aligned Residues 91 % Identity 25% Template c2edzA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:pdz domain-containing protein 1; PDBTitle: solution structures of the pdz domain of mus musculus pdz2 domain-containing protein 1 Resolution UNK

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		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	A	F	A	R	E	I	D	P	H	T	N	Y	L	S	P	R	N	T	E	Q	F	N	T	E	M	S	L	S	L	E	G	I	G	A	V	L	Q	M	D	D	D	Y	T	V	I	N	S	M	V	A	G	G	P	A	A	K	S	K	A	I	S	V	G	D	K	I	V	G	V	G	Q	T	G	K	P	M	V	D
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.																													.												.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.																													.												.	.	.	.	.
Template Sequence		S	S	G	M	A	S	T	F	N	P	R	E	C	K	L	S	K	Q	E	G	Q	N	Y	.	.	.	.	.	.	.	.	.	G	F	F	L	R	I	E	K	D	T	D	G	H	L	I	R	V	I	E	E	G	S	P	A	E	K	A	G	.	L	L	D	G	D	R	V	L	R	I	N	.	.	.	.	.	G	V	F
Template Known Secondary structure																				T	T				.	.	.	.	.	.	.	.	.	S							T	T			S								T	T		T	T	G	G	G	T	.			T	T							S	.	.	.	.	.	S	S	B
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																													.												.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.										.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.						.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	G	W	R	L	D	D	V	V	A	L	I	K	G	P	K	G	S	K	V	R	L	E	I	L	P
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		V	D	K	E	E	H	A	Q	V	V	E	L	V	R	K	S	.	G	N	S	V	T	L	L	V	L	D
Template Known Secondary structure			S	S	S												T	.		S
Template Predicted Secondary structure																		.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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