Job Description P23865 Confidence 98.78% Date Thu Jan 5 11:40:05 GMT 2012 Rank 92 Aligned Residues 74 % Identity 23% Template c2dkrA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:lin-7 homolog b; PDBTitle: solution structure of the pdz domain from human lin-72 homolog b Resolution UNK

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		247	.	.	250	.	.	.	.	.				.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		G	I	G	A	V	L	Q	M	D	.	.	.	D	D	Y	T	V	I	N	S	M	V	A	G	G	P	A	A	K	S	K	A	I	S	V	G	D	K	I	V	G	V	G	Q	T	G	K	P	M	V	D	V	I	G	W	R	L	D	D	V	V	A	L	I	K	G	P	K	G	S	K	V	R	L	E	I	L	P	A	G
Query Conservation											.	.	.
Alig confidence											.	.	.																																.	.	.	.	.																			.
Template Conservation																																													.	.	.	.	.																			.
Template Sequence		G	L	G	F	N	I	M	G	G	K	E	Q	N	S	P	I	Y	I	S	R	V	I	P	G	G	V	A	D	R	H	G	G	L	K	R	G	D	Q	L	L	S	V	N	.	.	.	.	.	G	V	S	V	E	G	E	Q	H	E	K	A	V	E	L	L	K	A	.	A	Q	G	S	V	K	L	V	V	R	S	G	P
Template Known Secondary structure										S	S	S	S	S										T	T	S										T	T		B					T	.	.	.	.	.	T				T	T	S												.			S
Template Predicted Secondary structure																																													.	.	.	.	.																			.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.						60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90
		324	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	S	G
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		91	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions