Job Description P23865 Confidence 98.68% Date Thu Jan 5 11:40:05 GMT 2012 Rank 134 Aligned Residues 73 % Identity 22% Template c2d90A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:pdz domain containing protein 1; PDBTitle: solution structure of the third pdz domain of pdz domain2 containing protein 1 Resolution UNK

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		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	G	A	V	L	Q	M	D	D	D	Y	T	V	I	N	S	M	V	A	G	G	P	A	A	K	S	K	A	I	S	V	G	D	K	I	V	G	V	G	Q	T	G	K	P	M	V	D	V	I	G	W	R	L	D	D	V	V	A	L	I	K	G	P	K	G	S	K	V	R	L	E	I	L	P	A	G	K	G	T
Query Conservation
Alig confidence																														.												.	.	.	.	.																				.
Template Conservation																														.												.	.	.	.	.																				.
Template Sequence		G	F	Y	L	R	A	G	P	E	Q	K	G	Q	I	I	K	D	I	E	P	G	S	P	A	E	A	A	G	.	L	K	N	N	D	L	V	V	A	V	N	.	.	.	.	.	G	K	S	V	E	A	L	D	H	D	G	V	V	E	M	I	R	K	G	.	G	D	Q	T	T	L	L	V	L	D	K	E	A	E	S
Template Known Secondary structure		S							S	S	S	S	S								T	T	S	T	T	T	T	T	T	.			T	T							S	.	.	.	.	.	S		B		T	T	S												S	.	T	T								S	T	T
Template Predicted Secondary structure																														.												.	.	.	.	.																				.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.						.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions