Job Description P23865 Confidence 98.93% Date Thu Jan 5 11:40:05 GMT 2012 Rank 35 Aligned Residues 74 % Identity 22% Template c1w9qB_ PDB info PDB header:cell adhesion Chain: B: PDB Molecule:syntenin 1; PDBTitle: crystal structure of the pdz tandem of human syntenin in2 complex with tnefaf peptide Resolution 1.7 Å

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		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	L	S	L	E	G	I	G	A	V	L	Q	M	D	D	D	Y	T	V	I	N	S	M	V	A	G	G	P	A	A	K	S	K	A	I	S	V	G	D	K	I	V	G	V	G	Q	T	G	K	P	M	V	D	V	I	G	W	R	L	D	D	V	V	A	L	I	K	G	P	K	G	S	K	V	R	L	E	I	L	P
Query Conservation
Alig confidence																																			.												.	.	.	.	.
Template Conservation																																			.												.	.	.	.	.
Template Sequence		K	D	Q	D	G	K	I	G	L	R	L	K	S	I	D	N	G	I	F	V	Q	L	V	Q	A	N	S	P	A	S	L	V	G	.	L	R	F	G	D	Q	V	L	Q	I	N	.	.	.	.	.	G	E	N	C	A	G	W	S	S	D	K	A	H	K	V	L	K	Q	A	F	G	E	K	I	T	M	T	I	R	D
Template Known Secondary structure				T	T	S										T	T									T	T	S					T	T	.			T	T							T	.	.	.	.	.	T				T	T														S	S	S
Template Predicted Secondary structure																																			.												.	.	.	.	.
Template SS confidence
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.						.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions