Job Description P23865 Confidence 98.66% Date Thu Jan 5 11:40:05 GMT 2012 Rank 137 Aligned Residues 66 % Identity 21% Template c1u39A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:amyloid beta a4 precursor protein-binding, PDBTitle: auto-inhibition mechanism of x11s/mints family scaffold2 proteins revealed by the closed conformation of the tandem3 pdz domains Resolution UNK

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		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	I	G	A	V	L	Q	M	D	D	D	Y	T	V	I	N	S	M	V	A	G	G	P	A	A	K	S	K	A	I	S	V	G	D	K	I	V	G	V	G	Q	T	G	K	P	M	V	D	V	I	G	W	R	L	D	D	V	V	A	L	I	K	G	P	K	G	S	K	V	R	L	E	I	L	P	A
Query Conservation
Alig confidence												.	.	.	.																.												.	.	.	.	.																				.
Template Conservation												.	.	.	.																.												.	.	.	.	.																				.
Template Sequence		Y	Q	L	G	F	S	V	Q	N	G	.	.	.	.	I	I	C	S	L	M	R	G	G	I	A	E	R	G	G	.	V	R	V	G	H	R	I	I	E	I	N	.	.	.	.	.	G	Q	S	V	V	A	T	P	H	E	K	I	V	H	I	L	S	N	A	.	V	G	E	I	H	M	K	T	M	P	A
Template Known Secondary structure					S					T	T	.	.	.	.							T	T	S	T					T	.			T	T							T	.	.	.	.	.	T			G	G	G	S											T		.
Template Predicted Secondary structure												.	.	.	.																.												.	.	.	.	.																				.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.					.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.		.	.	150	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions