Job Description P23865 Confidence 98.63% Date Thu Jan 5 11:40:05 GMT 2012 Rank 143 Aligned Residues 81 % Identity 22% Template c1r6jA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:syntenin 1; PDBTitle: ultrahigh resolution crystal structure of syntenin pdz2 Resolution 0.73 Å

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		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	I	D	P	H	T	N	Y	L	S	P	R	N	T	E	Q	F	N	T	E	M	S	L	S	L	E	G	I	G	A	V	L	Q	M	D	D	D	Y	T	V	I	N	S	M	V	A	G	G	P	A	A	K	S	K	A	I	S	V	G	D	K	I	V	G	V	G	Q	T	G	K	P	M	V	D	V	I	G	W	R
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.												.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.												.	.	.	.	.
Template Sequence		G	A	M	D	P	R	T	I	T	M	H	K	D	S	T	G	H	V	G	F	I	F	K	N	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	T	S	I	V	K	D	S	S	A	A	R	N	G	.	L	L	T	E	H	N	I	C	E	I	N	.	.	.	.	.	G	Q	N	V	I	G	L	K
Template Known Secondary structure			T	T											T	T	S								T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	S						T	.			S	S							T	.	.	.	.	.	T				T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.												.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.																.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.						.	.	.	.	.	.	.	250
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	D	V	V	A	L	I	K	G	P	K	G	S	K	V	R	L	E	I	L	P	A
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		D	S	Q	I	A	D	I	L	S	.	T	S	G	T	V	V	T	I	T	I	M	P	A
Template Known Secondary structure											.		S		S
Template Predicted Secondary structure											.
Template SS confidence
		251	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.	270	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions