Job Description P23865 Confidence 98.47% Date Thu Jan 5 11:40:05 GMT 2012 Rank 186 Aligned Residues 53 % Identity 23% Template c1obyA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:syntenin 1; PDBTitle: crystal structure of the complex of pdz2 of syntenin with2 a syndecan-4 peptide. Resolution 1.85 Å

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		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	N	S	M	V	A	G	G	P	A	A	K	S	K	A	I	S	V	G	D	K	I	V	G	V	G	Q	T	G	K	P	M	V	D	V	I	G	W	R	L	D	D	V	V	A	L	I	K	G	P	K	G	S	K	V	R	L	E	I
Query Conservation
Alig confidence																	.												.	.	.	.	.																		.
Template Conservation																	.												.	.	.	.	.																		.
Template Sequence		K	I	T	S	I	V	K	D	S	S	A	A	R	N	G	.	L	L	T	E	H	N	I	C	E	I	N	.	.	.	.	.	G	Q	N	V	I	G	L	K	D	S	Q	I	A	D	I	L	S	.	T	S	G	T	V	V	T	I	T	I
Template Known Secondary structure								T	T	S						T	.			T	T		B					T	.	.	.	.	.	T				T	T												.		S		S
Template Predicted Secondary structure																	.												.	.	.	.	.																		.
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.						.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions