Job Description P23865 Confidence 100.00% Date Thu Jan 5 11:40:05 GMT 2012 Rank 3 Aligned Residues 360 % Identity 15% Template c1k32E_ PDB info PDB header:hydrolase Chain: E: PDB Molecule:tricorn protease; PDBTitle: crystal structure of the tricorn protease Resolution 2.00 Å

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		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	G	N	D	T	Y	N	L	D	R	S	K	A	P	W	P	K	N	E	A	E	L	N	A	L	W	D	S	K	V	K	F	D	E	L	S	L	K	L	T	G	K	T	D	K	E	I	R	E	T	L	T	R	R	Y	K	F	A	I	R	R	L	A	Q	T	N	S	E	D	V	F	S	L	A	M	T	A	F	A
Query Conservation
Alig confidence															.			.	.	.											.																						.	.	.	.									.	.
Template Conservation															.			.	.	.											.																						.	.	.	.									.	.
Template Sequence		E	T	D	K	R	P	L	V	S	S	I	H	E	.	E	F	.	.	.	L	Q	M	Y	D	E	A	W	K	L	.	A	R	D	N	Y	W	N	E	A	V	A	K	E	I	S	E	R	I	Y	E	K	.	.	.	.	Y	R	N	L	V	P	L	C	.	.	K	T	R	Y	D	L	S	N	V	I	V	E	M	Q	G
Template Known Secondary structure					S	S									.			.	.	.											.						S																.	.	.	.			T	T	G	G	G		.	.		S
Template Predicted Secondary structure															.			.	.	.											.																						.	.	.	.									.	.
Template SS confidence
		672	.	.	.	.	.	.	.	680	.	.	.	.		.	.				.	.	.	690	.	.	.	.	.	.		.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.					.	.	720	.	.	.	.	.			.	.	.	.	730	.	.	.	.	.	.	.	.	.	740
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.									.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.
Query Sequence		R	E	I	D	P	H	T	N	Y	L	S	P	R	N	T	E	Q	F	N	T	E	M	S	L	S	L	E	G	I	G	A	V	L	Q	M	D	D	D	Y	T	V	I	N	S	M	V	A	G	.	.	.	.	.	.	.	.	G	P	A	A	K	S	K	A	I	S	V	G	D	K	I	V	G	V	G	Q	T	G	K	P
Query Conservation																																																		.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		E	Y	R	T	S	H	S	Y	E	M	G	G	.	.	.	.	T	F	T	D	K	D	P	F	R	S	G	R	I	A	C	D	F	K	L	D	G	D	H	Y	V	V	A	K	A	Y	A	G	D	Y	S	N	E	G	E	K	S	P	I	F	E	Y	G	I	D	P	T	G	Y	L	I	E	D	I	D	G	E	T	V	G
Template Known Secondary structure		T	T			S								.	.	.	.												B		S							T	T									B	S		T	T	S	T	T		B		G	G	G	G	G	T				T	T							T	T				B
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		741	.	.	.	.	.	.	.	.	750	.	.					.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.					.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.
Query SS confidence																																																							.	.	.	.
Query Sequence		M	V	D	V	I	G	W	R	L	D	D	V	V	A	L	I	K	G	P	K	G	S	K	V	R	L	E	I	L	P	A	G	K	G	T	K	T	R	T	V	T	L	T	R	E	R	I	R	L	E	D	R	A	.	.	.	.	V	K	M	S	V	K	T	V	G	K	E	K	V	G	V	L	D	I	P	G	F	Y	V
Query Conservation																																																							.	.	.	.
Alig confidence				.	.	.	.	.	.	.																																													.	.	.	.
Template Conservation				.	.	.	.	.	.	.
Template Sequence		A	G	.	.	.	.	.	.	.	S	N	I	Y	R	V	L	S	E	K	A	G	T	S	A	R	I	R	L	S	G	K	G	G	D	K	R	D	L	M	I	D	I	L	D	D	D	R	F	I	R	Y	R	S	W	V	E	A	N	R	R	Y	V	H	E	R	S	K	G	T	I	G	Y	I	H	I	P	D	M	G	M
Template Known Secondary structure		T	T	.	.	.	.	.	.	.	B								T	T	T	T	S									S	S	S										B	S																						T	T	T										B	S
Template Predicted Secondary structure				.	.	.	.	.	.	.
Template SS confidence
		817	.								.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	T	D	D	V	K	V	Q	L	Q	K	L	E	K	Q	N	V	S	S	V	I	I	D	L	R	S	N	G	G	G	A	L	T	E	A	V	S	L	S	G	L	F	I	P	A	G	P	I	V	Q	V	R	D	N	N	G	K	V	R	E	D	S	D	T	D	G	Q	V	F	Y	K	G	P	L	V	V	L	V	D
Query Conservation
Alig confidence												.	.																											.	.	.																						.	.	.	.
Template Conservation												.	.																											.	.	.																						.	.	.	.
Template Sequence		M	G	L	N	E	F	Y	R	L	F	.	.	I	N	E	S	S	Y	Q	G	L	I	V	D	V	R	F	N	G	G	G	F	V	S	Q	L	I	I	.	.	.	E	K	L	M	N	K	R	I	G	Y	D	N	P	R	R	G	T	L	S	P	Y	.	.	.	.	P	T	N	S	V	R	G	K	I	I	A	I	T	N
Template Known Secondary structure												.	.				T	T	S	S							T	T				B	S							.	.	.				T		B								S	S	S						.	.	.	.	S	T	T		B		S
Template Predicted Secondary structure												.	.																											.	.	.																						.	.	.	.
Template SS confidence
		890	.	.	.	.	.	.	.	.	.			900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.				.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.					.	.	.	950	.	.	.	.	.	.	.	.	.	960
		448	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.		.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.
Predicted Secondary structure																																		.																												.
Query SS confidence																																		.																												.
Query Sequence		R	F	S	A	S	A	S	E	I	F	A	A	A	M	Q	D	Y	G	R	A	L	V	V	G	E	P	T	F	G	K	G	T	.	V	Q	Q	Y	R	S	L	N	R	I	Y	D	Q	M	L	R	P	E	W	P	A	L	G	S	V	Q	Y	.	T	I	Q	K	F	Y	R	V	N	G	G	S	T	Q	R	K	G	V	T
Query Conservation																																		.																												.
Alig confidence																																		.												.	.	.	.	.	.	.	.	.	.	.	.					.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Y	A	G	S	D	G	D	I	F	S	F	S	F	K	K	L	G	L	G	K	L	I	G	T	R	T	W	G	G	V	V	G	I	T	P	K	R	R	L	I	D	G	T	.	.	.	.	.	.	.	.	.	.	.	.	V	L	T	Q	P	E	F	A	F	W	F	R	D	A	G	F	G	V	E	N	Y	G	V	D
Template Known Secondary structure		T	T			T												T	T	S						S														B		T	T	S		.	.	.	.	.	.	.	.	.	.	.	.											B	T	T	T	B	T	T	T	T	T	T
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		961	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.													.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.
		526	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	I	I	M	P	T	G	N	E	E	T	E	T	G	E	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	D	V	E	I	E	Y	A	P	H	D	Y	L	S	G	K	D
Template Known Secondary structure			S													T
Template Predicted Secondary structure
Template SS confidence
		1029	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions