Return to main results Retrieve Phyre Job Id

Job DescriptionP08202
Confidence100.00%DateThu Jan 5 11:00:56 GMT 2012
Rank3Aligned Residues170
% Identity99%Templated2ajta1
SCOP infoReductase/isomerase/elongation factor common domain FucI/AraA C-terminal domain-like AraA C-terminal domain-like
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   329330.........340.........350.........360.........370.........380.........390.........400........
Predicted Secondary structure 






































Query SS confidence 















































































Query Sequence  TSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAAEEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVN
Query Conservation   

 



 

  
   

  




 




  

 
 
 

 

 
  
  
 
    

 
  

 
 
 





 
Alig confidence 















































































Template Conservation 







 

  
   








 
 


  

 
 
 

 



 






    



  

 
 
 





 
Template Sequence  TSFMEDYTYHFEKGNDLVLGSHMLEVCPSIAVEEKPILDVQHLGIGGKDDPARLIFNTQTGPAIVASLIDLGDRYRLLVN
Template Known Secondary structure 


TT


SS


GGGBSS







TTTT
S




BB


SSS
Template Predicted Secondary structure 






































Template SS confidence 















































































   329330.........340.........350.........360.........370.........380.........390.........400........
 
   409410.........420.........430.........440.........450.........460.........470.........480........
Predicted Secondary structure 































Query SS confidence 















































































Query Sequence  CIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDA
Query Conservation   

 
  
   
 



       
       


 


 

 


       
   


 


 
 
   
        
Alig confidence 















































































Template Conservation 


 
     

 



 
 
   
 
     


 





 


           


 


 
 
   
    

 
Template Sequence  CIDTVKTPHSLPKLPVANALWKAQPDLPTASEAWILAGGAHHTVFSHALNLNDMRQFAEMHDIEITVIDNDTRLPAFKDA
Template Known Secondary structure 


SS

TT

S
BSS
T


SSS

TT
STT

Template Predicted Secondary structure 































Template SS confidence 















































































   409410.........420.........430.........440.........450.........460.........470.........480........
 
   489490........
Predicted Secondary structure 
Query SS confidence 









Query Sequence  LRWNEVYYGF
Query Conservation 
         
Alig confidence 









Template Conservation 
  
      
Template Sequence  LRWNEVYYGF
Template Known Secondary structure 

Template Predicted Secondary structure 




Template SS confidence 









   489490........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions