Job Description P08202 Confidence 32.95% Date Thu Jan 5 11:00:56 GMT 2012 Rank 62 Aligned Residues 115 % Identity 15% Template c3qk7C_ PDB info PDB header:transcription regulator Chain: C: PDB Molecule:transcriptional regulators; PDBTitle: crystal structure of putative transcriptional regulator from yersinia2 pestis biovar microtus str. 91001 Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.
Predicted Secondary structure																																																																															.
Query SS confidence																																																																															.
Query Sequence		K	L	P	C	K	L	V	L	K	P	L	G	T	T	P	D	E	I	T	A	I	C	R	D	A	N	Y	D	D	R	C	A	G	L	V	V	W	L	H	T	F	S	P	A	K	M	W	I	N	G	L	T	M	L	N	K	P	L	L	Q	F	H	T	Q	F	N	A	A	L	P	W	D	S	I	D	M	D	.	F	M
Query Conservation																																																																															.
Alig confidence										.																			.																		.	.																							.								.
Template Conservation										.																			.																		.	.																							.
Template Sequence		K	R	G	L	D	L	L	L	.	I	P	D	E	P	G	E	K	Y	Q	S	L	I	H	L	V	E	T	.	R	R	V	D	A	L	I	V	A	H	T	Q	P	E	D	F	R	.	.	L	Q	Y	L	Q	K	Q	N	F	P	F	L	A	L	G	R	S	H	L	P	K	P	.	Y	A	W	F	D	F	D	N	H	A
Template Known Secondary structure		T	T	T						.					T	T												T	.	T			S						S			S	S				.	.							T	T							S					S	S		.
Template Predicted Secondary structure										.																			.																		.	.																							.
Template SS confidence
		38	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	L	N	Q	T	A	H	G	G	R	E	F	G	F	I	G	A	R	M	R	Q	Q	H	A	V	V	T	G	H	W	Q	D	K	Q	A	H	E	R	I	G	S	W	M	R	Q	A	V
Query Conservation
Alig confidence									.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.
Template Sequence		G	A	S	L	A	V	K	.	.	.	.	.	.	R	L	L	E	L	G	H	Q	R	I	A	F	V	S	T	D	A	R	I	S	Y	V	D	Q	R	L	Q	G	Y	V	Q	T	X	S
Template Known Secondary structure									.	.	.	.	.	.					T	T			S								S		S
Template Predicted Secondary structure									.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.							120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions