 |
Job Description | P08202 | Confidence | 30.80% | Date | Thu Jan 5 11:00:56 GMT 2012 |
Rank | 72 | Aligned Residues | 60 |
% Identity | 20% | Template | c3oa0B_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:lipopolysaccaride biosynthesis protein wbpb; |
PDBTitle: crystal structure of the wlba (wbpb) dehydrogenase from thermus2 thermophilus in complex with nad and udp-glcnaca
|
Resolution | 2.00 Å |
|
 |
  |   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | A | E | H | V | V | N | A | L | N | T | E | A | K | L | P | C | K | L | V | L | K | P | L | G | T | T | P | D | E | I | T | A | I | C | R | D | A | N | Y | D | D | R | C | A | G | L | V | V | W | L | H | T | F | S | P | A | K | M | W | I | N | G | L |
Query Conservation |   |
  |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
|
|   |
|   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |   |
| . | . | . |
|
|
|
|   |   |   |   |
|
|   |   |
|   |   |   |
|   |   | . |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |
|   |   |
Template Sequence |   |
H | Y | P | Q | I | R | M | A | L | R | L | G | A | N | A | L | S | E | . |
. |
. |
K | P | L | V | L | W | P | E | E | I | A | R | L | K | E | L | E | A | R | . |
T | G | R | R | V | Y | T | V | L | Q | L | R | V | H | P | S | L | L | A | L | K | E | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
| . | . | . | S | S | S |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |  | T |
|
|  |  |  |
|
| G | G | G | G |
|  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|