Job Description P08202 Confidence 43.01% Date Thu Jan 5 11:00:56 GMT 2012 Rank 38 Aligned Residues 146 % Identity 8% Template c3hcwB_ PDB info PDB header:rna binding protein Chain: B: PDB Molecule:maltose operon transcriptional repressor; PDBTitle: crystal structure of probable maltose operon transcriptional repressor2 malr from staphylococcus areus Resolution 2.20 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																												.
Query SS confidence																												.
Query Sequence		L	Y	G	P	E	T	L	R	Q	V	T	Q	H	A	E	H	V	V	N	A	L	N	T	E	A	K	.	L	P	C	K	L	V	L	K	P	L	G	T	T	P	D	E	I	T	A	I	C	R	D	A	N	Y	D	D	R	C	A	G	L	V	V	W	L	H	T	F	S	P	A	K	M	W	I	N	G	L	T	M	L
Query Conservation																												.
Alig confidence																												.																											.															.	.
Template Conservation																																																							.															.	.
Template Sequence		L	K	G	S	E	E	P	I	R	L	N	P	F	Y	I	N	V	L	L	G	I	S	E	T	C	N	Q	H	G	Y	G	T	Q	T	T	V	S	N	N	M	N	D	L	M	D	E	V	Y	K	M	I	K	Q	.	R	M	V	D	A	F	I	L	L	Y	S	K	E	N	.	.	D	P	I	K	Q	M	L	I	D	E
Template Known Secondary structure			S			S					T																		T	T										S														T	.	T			S					S				T	T	.	.										T
Template Predicted Secondary structure																																																							.															.	.
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	P	L	L	Q	F	H	T	Q	F	N	A	A	L	P	W	D	S	I	D	M	D	F	M	N	L	N	Q	T	A	H	G	G	R	E	F	G	F	I	G	A	R	M	R	Q	Q	H	A	V	V	T	G	H	W	Q	D	K	Q	A	H	E	R	I	G	S	W	M	R	Q	A	V	S	K
Query Conservation
Alig confidence										.	.	.	.
Template Conservation										.	.	.	.
Template Sequence		S	M	P	F	I	V	I	G	.	.	.	.	K	P	T	S	D	I	D	H	Q	F	T	H	I	D	N	D	N	I	L	A	S	E	N	L	T	R	H	V	I	E	Q	G	V	D	E	L	I	F	I	T	E	K	G	N	F	E	V	S	K	D	R	I	Q	G	F	E	T	V	A	S	Q	F
Template Known Secondary structure		T							S	.	.	.	.				S	S	G	G	G	S	S																					T			S								S	S																			T
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150					.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions