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Job Description | P08202 | Confidence | 22.23% | Date | Thu Jan 5 11:00:56 GMT 2012 |
Rank | 118 | Aligned Residues | 135 |
% Identity | 13% | Template | c3eb2A_ |
PDB info |
PDB header:lyase | Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; |
PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution
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Resolution | 2.04 Å |
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11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | |
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Predicted Secondary structure |   |
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Query Sequence |   |
F | V | I | G | S | Q | H | L | Y | G | P | E | T | L | R | Q | V | T | Q | H | A | E | H | V | V | N | A | L | N | T | E | A | K | L | P | C | K | L | V | L | K | P | L | G | T | T | P | D | E | I | T | A | I | C | R | D | A | N | Y | D | D | R | C | A | G | L | V | V | W | L | H | T | F | . |
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S | P | A | K | M |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
T | P | L | G | S | T | G | E | F | A | Y | L | G | T | A | Q | R | E | A | V | V | R | A | T | I | E | A | A | Q | R | R | . |
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V | P | V | V | A | G | V | A | S | T | S | V | A | D | A | V | A | Q | A | K | L | Y | E | . |
K | L | G | A | D | G | I | L | A | I | L | E | A | Y | F | P | L | K | D | A | Q |
Template Known Secondary structure |   |
B | T | T | S | G | G | G | T | G | G | G |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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43 | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
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Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
W | I | N | G | L | . |
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T | M | L | N | K | P | L | L | Q | F | H | T | Q | F | . |
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M | D | . |
F | M | N | L | N | Q | T | A | H | G | G | R | E | F | G | F | I | G | A | R | M | R | Q | Q | H | A | V | V | T | G | H |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
I | E | S | Y | F | R | A | I | A | D | A | V | E | I | P | V | V | I | Y | T | N | P | Q | F | Q | R | S | D | L | T | L | D | V | I | A | R | L | A | E | H | P | R | I | R | Y | I | K | D | A | S | T | N | T | G | R | L | L | S | I | I | N | R | C | G | D | A | L | Q | V | F | S | A | S |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
118 | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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