Job Description P08202 Confidence 31.71% Date Thu Jan 5 11:00:56 GMT 2012 Rank 68 Aligned Residues 137 % Identity 12% Template c2rjoA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:twin-arginine translocation pathway signal protein; PDBTitle: crystal structure of twin-arginine translocation pathway signal2 protein from burkholderia phytofirmans Resolution 2.05 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		R	Q	V	T	Q	H	A	E	H	V	V	N	A	L	N	T	E	A	K	L	P	C	K	L	V	L	K	P	L	G	T	T	P	D	E	I	T	A	I	C	R	D	A	N	Y	D	D	R	C	A	G	L	V	V	W	L	H	T	F	S	P	A	.	.	K	M	W	I	N	G	L	T	M	L	N	K	P	L	L	Q
Query Conservation																																																																.	.
Alig confidence																	.	.	.	.	.	.																									.																	.	.
Template Conservation																	.	.	.	.	.	.																									.
Template Sequence		T	A	F	N	K	G	A	Q	S	F	A	K	S	V	G	.	.	.	.	.	.	L	P	Y	V	P	L	T	T	E	G	S	S	E	K	G	I	A	D	I	R	A	L	L	Q	.	K	T	G	G	N	L	V	L	N	V	D	P	N	D	S	A	D	A	R	V	I	V	E	A	C	S	K	A	G	A	Y	V	T	T
Template Known Secondary structure																T	.	.	.	.	.	.									T	T															.		T	T	T									S	S															T
Template Predicted Secondary structure																	.	.	.	.	.	.																									.
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70							.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.																							.	.
Query SS confidence																	.	.																							.	.
Query Sequence		F	H	T	Q	F	N	A	A	L	P	W	D	S	I	D	.	.	M	D	F	M	N	L	N	Q	T	A	H	G	G	R	E	F	G	F	I	G	A	R	.	.	M	R	Q	Q	H	A	V	V	T	G	H	W	Q	D	K	Q	A	H	E	R	I	G	S	W	M	R	Q	A	V
Query Conservation																	.	.																							.	.
Alig confidence																	.	.																							.	.
Template Conservation
Template Sequence		I	W	N	K	P	K	D	L	H	P	W	D	Y	N	P	N	Y	V	A	H	L	S	Y	D	G	V	A	Y	G	E	E	T	A	T	Q	L	F	K	S	X	G	G	K	G	G	V	V	A	L	G	G	I	F	S	N	V	P	A	I	E	R	K	A	G	L	D	A	A	L	K
Template Known Secondary structure			S				T	T			G	G	G	G	T	T	T																								T	T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions