Job Description P08202 Confidence 37.66% Date Thu Jan 5 11:00:56 GMT 2012 Rank 51 Aligned Residues 155 % Identity 15% Template c2r9vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp synthase subunit alpha; PDBTitle: crystal structure of atp synthase subunit alpha (tm1612) from2 thermotoga maritima at 2.10 a resolution Resolution 2.10 Å

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		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.							.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.
Query Sequence		R	H	L	K	V	C	R	F	G	D	N	M	R	E	V	A	V	T	D	G	D	K	V	A	A	Q	I	K	F	G	F	S	V	N	T	W	A	V	G	D	L	V	Q	V	V	N	S	I	S	D	G	D	V	N	A	L	V	D	E	Y	E	S	C	.	.	.	.	.	.	Y	T	M	T	P	A	T	Q	I	H	G
Query Conservation																																																																	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.																.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.
Template Sequence		R	G	Q	R	E	L	I	I	G	D	R	Q	T	G	K	T	A	I	A	I	D	T	I	I	N	Q	K	G	Q	G	V	Y	C	I	Y	V	A	I	G	Q	.	.	.	.	.	.	.	.	K	K	S	A	I	A	R	I	I	D	K	L	R	Q	Y	G	A	X	E	Y	T	T	V	V	V	A	S	A	S	D	P	A
Template Known Secondary structure		T	T		B							T	T	S	S											T	T	T	T	T	T									S		.	.	.	.	.	.	.	.															T	T	G	G	G	G								T	T	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.									.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.					.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure																																							.	.	.	.
Query SS confidence																																							.	.	.	.
Query Sequence		K	K	R	Q	N	V	L	E	A	A	R	I	E	L	G	M	K	R	F	L	E	Q	G	G	F	H	A	F	T	T	T	F	E	D	L	H	G	.	.	.	.	L	K	Q	L	P	G	L	A	V	Q	R	L	M	Q	Q	G	Y	G	F	A	G	E	G	D	W	K	T	A	A	L	L	R	I	M	K	V	M	S	T
Query Conservation																																							.	.	.	.
Alig confidence				.	.	.																						.											.	.	.	.																												.
Template Conservation				.	.	.																						.																																										.
Template Sequence		S	L	.	.	.	Q	Y	I	A	P	Y	A	G	C	A	X	G	E	Y	F	A	Y	S	G	R	D	.	A	L	V	V	Y	D	D	L	S	K	H	A	V	A	Y	R	Q	L	S	L	L	X	R	R	P	P	G	R	E	A	Y	P	G	D	I	F	Y	L	H	S	R	.	L	L	E	R	A	V	R	L	N	D	K
Template Known Secondary structure				.	.	.																	T	T	T			.							T														T	S				T	T															.			T	T				B		T	T
Template Predicted Secondary structure				.	.	.																						.																																										.
Template SS confidence
		234	.				.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.		.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300	.	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	Q	G	G	T	S	F	M	E	D	Y	T	Y	H	F	E	K	G	N
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	L	G	G	G	S	L	T	A	L	P	I	V	E	T	Q	A	N	D
Template Known Secondary structure		.	.	T	T	S												S	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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