Job Description P75942 Confidence 3.92% Date Thu Jan 5 12:16:14 GMT 2012 Rank 96 Aligned Residues 150 % Identity 7% Template c1yt3A_ PDB info PDB header:hydrolase,translation Chain: A: PDB Molecule:ribonuclease d; PDBTitle: crystal structure of escherichia coli rnase d, an2 exoribonuclease involved in structured rna processing Resolution 1.60 Å

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		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.																										.	.
Query SS confidence																				.	.	.	.																										.	.
Query Sequence		I	R	P	V	A	R	Q	V	E	G	M	F	V	Q	M	M	L	K	.	.	.	.	S	M	R	D	A	L	P	K	D	G	L	F	S	S	E	H	T	R	L	Y	T	S	M	Y	D	.	.	Q	Q	I	A	Q	Q	M	T	A	G	K	G	L	G	L	A	E	M	M	V	K	Q	M	T	P	E	Q	P	L	P	E
Query Conservation																				.	.	.	.																										.	.
Alig confidence																				.	.	.	.																										.	.
Template Conservation
Template Sequence		L	P	A	A	L	D	E	C	R	L	M	Q	M	R	R	Q	E	V	V	A	P	E	D	A	W	R	D	I	T	N	A	W	Q	L	R	T	R	Q	L	A	C	L	Q	L	L	A	D	W	R	L	R	K	A	R	E	R	D	L	A	V	N	F	V	V	R	E	E	H	L	W	S	V	A	R	Y	M	P	G	S	L
Template Known Secondary structure																						G	G	G	G	G	G	G	S	T	T	G	G	G	S																							T			G	G	G	T	S															S
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		107	.						.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure				.	.	.	.	.
Query SS confidence				.	.	.	.	.
Query Sequence		E	S	.	.	.	.	.	T	P	A	A	P	M	K	F	P	L	E	T	V	V	R	Y	Q	N	Q	A	L	S	Q	L	V	Q	K	A	V	P	R	N	Y	D	D	S	L	P	G	D	S	K	A	F	L	A	Q	L	S	L	P	A	Q	L	A	S	Q	Q	S	G	V	P	H	H	L	I	L	A	Q	A	A	L	E
Query Conservation				.	.	.	.	.
Alig confidence				.	.	.	.	.
Template Conservation
Template Sequence		G	E	L	D	S	L	G	L	S	G	S	E	I	R	F	H	G	K	T	L	L	A	L	V	E	K	A	Q	T	L	P	E	D	A	L	P	Q	P	M	L	N	L	M	D	M	P	G	Y	R	K	A	F	K	A	I	K	S	L	I	T	D	V	S	E	T	H	K	I	S	A	E	L	L	A	S	R	R	Q	I	N
Template Known Secondary structure							T	T																							S		G	G	G	S							G	G	G	S	T	T																				T
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		182
Predicted Secondary structure
Query SS confidence
Query Sequence		S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		336

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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